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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp13913_c1_seq1
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		cryptochrome_1_[Bombyx_mori]
Ontology
GO:0000060 P obsolete protein import into nucleus, translocation
GO:0000166 F nucleotide binding
GO:0005634 C nucleus
GO:0005641 C nuclear envelope lumen
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007165 P signal transduction
GO:0009785 P blue light signaling pathway
GO:0009881 F photoreceptor activity
GO:0009882 F blue light photoreceptor activity
GO:0018298 P protein-chromophore linkage
GO:0042752 P regulation of circadian rhythm
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0048471 C perinuclear region of cytoplasm
GO:0048511 P rhythmic process
GO:0050660 F flavin adenine dinucleotide binding
GO:0050896 P response to stimulus
Transcript
Level		FPKM:0.96 TPM:1.04
ORF EntryO_BomoOtmSK11455_5prime_partial:A_BomoOtmSK_comp13913_c1_seq1
Sequence
(Nucleotide)
GTCACCGATGGTCGCCACAGTATGCAGAAACATTTGGTACGTGAGCGGCGGTATTCCCCC
GTTCGCTTTGATGACGGTGTCGGGCTCCCACAGGGTGTGCGACACGTGCTCCCGACACGT
GACCCCGATCTCGCGGCACGCCGTCTTCACGCTCTCGTCCCTGGGACGCCACACCGGCTC
GCAGTCCTGTTCGAAGCACAACTTCCGAATACCAAATTCTTCCCAGAGTCTGCGGAACAC
AGCACTAGGCTTCCCTTTAACAAGGAGTAATCTTCCGCCGTACTTCTTGAATTGCTTGTC
CAAATCATCTAATGCTTCTAGCAAGTACCGCATTCGGTTGTACCCGACCACTTTCGTTCC
AGCAGTTTCCCCGTCAAAAATGAAAATGGGAAAGAAAGGGCCGCTCGTTTCTTCCAACGC
CGAATGAAGAGACGGATTGTCGTGGAGACGCAGCCCGTGACGGAACCACAGAACGCTACC
GCCAAGCATCTTTAGTATCCCCTTACAATTATTCGTTTAGAAATCTGATTTGTAGTTATG
CTCAACTTCAAAGTAATGTTGTCATTTAATTTATATTGTAGACTTGTAGAGGGATTGTTT
TCAGGAGCGGAGCTCATAAAGTATTGCTTTTTTAATATTAATATTACTTTCGACCAATAA
GAAGAAAGTTCTCATCACTTTGTTGTTCGACAGAAGTAAAGATAACTTTTAGAAGATTTT
TATAGGTACCAACAATAATAATTTGTATAGTTTATCCAAGCTTAGCGGATCAATGTAGTA
AACAAACAGCACTTTTCAAAATATCACGATT
(811 bp)

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