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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp13912_c0_seq6
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		nesprin-1_isoform_X3_[Bombyx_mori]
Ontology
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005640 C nuclear outer membrane
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0006997 P nucleus organization
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030017 C sarcomere
GO:0031965 C nuclear membrane
GO:0034993 C meiotic nuclear membrane microtubule tethering complex
GO:0040023 P nuclear migration
GO:0042692 P muscle cell differentiation
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0045211 C postsynaptic membrane
GO:0051015 F actin filament binding
GO:0090286 P obsolete cytoskeletal anchoring at nuclear membrane
GO:0090292 P nuclear matrix anchoring at nuclear membrane
Transcript
Level		FPKM:6.72 TPM:7.24
ORF EntryO_BomoOtmSK11452_complete:A_BomoOtmSK_comp13912_c0_seq6
Sequence
(Nucleotide)
CCCGCACGCGCGCCGCGTCCCGAGCGTCGTGCGCATGCGCCGCCACGTGCCCCCCAACCA
CGTTGAGCGACACCACGATCGACTTGTGCGAGTCAAGGTCCAGCAGGAACTCGCGGTGGT
CCTGTATAGCGTCTTCGAGTAAGTCGTATTGTTCAGGCGGCTCGGTTCTGGAAGCTTCCG
TGGCCTCGGCGAACTGCAGCCACTGCTCCAGCCGCCAGAGGTCGTTGTCCAGCTGCTTCC
AGTTCCGCTCCGAGCACAGCGGGCAGGTCAGCCTGCCGGACTCGTGTTCGCACGTGAGCG
CGTATGACGCGGAGTGGGGCAACCTCAGGTTGTTGATTTGGAGCTCCCTCTTCTTGGCTT
GCGTCAACAGGTCTTCGTACCGCAACGAGAGAGACTCAACTTCCTTCATCATGGCCTCGT
CCTCGGTGGCGTCGCACTCTGTCAGCAGCAGCTCCGAGAGGTGCTTGGCCAGCTCTAAGG
TCTGTCCGGGCTTGGCTCCGGCTTTGGCGATTTCTTTTGCGGCCGCGGCCAGTTCATCGC
TTCCGGCGTTGTCTTTGAGCTGCTGCTGCAACGCGAGTTCCAGCACTTCGAGCGCCTCCG
AGGTGTCCCTCACGGCCGACGCCAGTTCAGCTCGGTACGTCTCCTTCGAGGTGAGGGTGT
CTACTTGTAGGGCTGCGTCCGTCTCCCATTTTAAAGTGTCAACTTGAACGGCAGTGTCCA
CGTCGCCGACGACCTCTGCTCTGGCCAGGTCCAGTCGCAACCTGACATCCGCATATAAGG
CGCGGTACTCTGCAACCATTTCAGAAACGCCTTGCGCTGTTGAAACTTTAGCAGCCAAGC
GATCGGCGTCATCCACTAAGGCTTGACATTCAGCCAGTTCTTTTTCAACCAACTCTAGTT
CTTTTAAGGTGGCCTCTTTGTCCAAGGGAGTGGGAGCAAGGTGCAGAGCTCGGGTCAGTC
TGACGTCGACTTCGGCCAACGCGACGACTGCTTTTCCGTGTGCCGCCACAAACTGTCTGT
GGACGTCTGCGCCGGCGGCGTCTACCCTGCCCCTGAGCTGTTGCCAGCGACGGATCGCCG
ACCGCATCTTCGCAGCTTCGTCTGCCCCTTGGCCACGAAGCTCTACGCCTCTTGCAGACG
CCACGCGGCTGTATGCATCCTCTAACCGCTTGAGGTTGGGTTCTAATGCTTCCAAGTCTT
TAATTACGGCCTTCGAAACCGTTTCATCTTCATGTTCACCACGTTGTTTTCTGGTTTCAA
TTTTCTCAACTCTCTTCTCGATTGAATCGAGTTTCTTGACGAATTTAGGTAGAACAGACG
AAGATAGTTCGGCAGATTTACGAATTTCTTTCAGCGTATTCTTGCGATGTTCAGAAGTGT
CGCAAATATTTTTCCATTTCTTTTCGACGATGTCCACTCCGGTTCTTAAGTTTCTGAGAT
CGAAGTTACCTTTGAGAACATCGGGGTCGTTGAACACAAGATCGCAGAGATTCAAAGTTT
CACACACCTCTCCACTTTCGGCTTCAATTTCTTTATGTGTATCGTCTCGTTCTTTGAATT
TCTCATCCACGCTCTTTGTCGTTAGGTATTCTAAGACAACAGTCGTTGTCAATTTCGACT
CTATGACGTGTAGTTTTGTTCTGATTTCTGTAAGCCTCTCTTCGAGCTGTGTTATAGTTT
CTAATAATTCAGTAATTTTCACAATTCTAGATCTACCGGTTTCCTGGAGTTTTCGCCATT
TTTCTTCCATGTCCTTCAACTGCTTTGATGTATTTTTGCTATATGACTTTTCCTCTTTCT
TTGCTAGCTCTATAAGAGAACTACCGGTTTCAGAGAGCCATTCAAATTCACGTTCCTTCA
TAGCAGTTTCTGCTTGAACATCAGCGTTCAGCCTTCTGATCAAATCGTGAGGATCTAAAG
CGGTGATGTCGCTGCTGCTACTGCCCGAAGTCTCTAAACGTTTTTCGACAGTTGTCATCC
ATTCTGTGAATCGTTTGAATCGCGTGTCAAATATGGCGTAGATTTCCAGTCGTTCTTGAA
GTCTGTGAATGATGATAGATAGTTGATGTTCAAGGTCAGCGCGTTGTTGCCTCAGTTGCC
ATATTCTTTGGTTCACTATTCTCATATCCTGCGGGCTCAAGCATTCCTTCAACTGTTCCT
GGATGACGCTCAAAGCCTCAATCTGCGTTTCGCTCTTTTCAATCTTTGTCCGTAAATCTG
TATATTTATCAATAATTTTCTTGAGTTGCGGTCGGGATAATTTCTCCTCGTCAGTATATG
AACTAATGTCGTCTTGTGTCTTTGAGTACATTTTGTGTAAATCACTAGTCAAGCGTTCGT
ATTCACCGATCAGGCCTAGAATTCGAGTTAAGAAGTCTCTCCAGGTGTTGAGGCTAGCTT
GCAGATTCTCGACTCTCTTCACACTCCCGGCGTATTCCATTTTGACGGAGGCTCCATAAG
CTTCCTCAGTGAACTGTAATACTTTCTTGAGATTGACTAGAAGTTTATCAGACTGTTTGC
GGCCCTCGGGCACTTTGTCAGCGAGATTCTGTATTTTGGATAAGATCTTGTGTATCCTCT
TCATGTGAACGTATCTGAGTTGCAGCTTTTCTTTTTCGCGTTCCATTTCTTTAAGCCATC
TCAATAGTTCAGTGTAATTCTCTCTATAGTCGTCCCAGGCTCCGATGCGGGCGCACACTT
CATCGTGTCTTTCGACAATTCTCGCTAGGGTTTCATTGTGGAGATTAGTAAGGGTGTCGA
ATTTGTCGGCCAAGTCCTTATTCTTAGTATCCCTGTTTTCGTTTATTAGGACCGAGCGTT
GCGAAGTGAGTAGATTTCTGTGGACCCTGCACAGACGTTTGTGCTCAGTTAGGTTTTCGT
AATCTGTTGGAACTCCGCTTGACAAGAACGACTGTAAGTCGATCAAGTACTCGTGCCATA
GTCTGAGCGCAGTGGCCGCATCACCAGACCTAACCAGGGCGGTCGATAGCCTGTGGTAAT
GCAAGAATGTGTCTCTGAACATAGCCTGCCATAGTTCCAAGATCCTAACGATCGAATGTT
CTTCGGAAACGTCTCTATCGATGTCGGGCAGTTCCGCCGTGGCTGGAGCGATGTCCGCTT
CACTCTTACCCAGCGCGATAAGGTTTTCTCGTAACGCTATCAGTTTGTCTTCAACGATTT
CTCCGTCTTCGTGCAGCGGAGCCAAGTCCTGTCTCATGTCACATAGTTTCTCTTTGGCGT
GCTGCGCTTTAGCTCGTGCGCTCTGCCGGGCTTCGCCCAGATCCGCCAGGACCTGGACAG
CGCCGGCGACCAGCTGCAGCCTTCGGGCCAGTGCGTCAGCGTCGGCCTGTAGAGCCCTTG
ACCCAGTTTCCGCGGCGACTCTCGCTGCCAACGATCGGAGTTCAGCTACTCTGGCTTCTT
GTTCCAAGCATGCCTCTTGAAGTGACATTTTCGTATAATAAATCACACAGCGAGCCACTG
ACACATATTTCTTATCGCATCACCATAATAATAAAGAAAAAACAAAATCATATCACACAT
TTGACAAGGACAGTTATAAAATATCACAAGTGATTAGCGGTATTTCGATTCACGAGTTTT
TAGCTTTGAATTGTTAATTGTCATGGTAATTTGAGGGTATTTTTGATTTGACTTTTATAT
TACTATTATTATTTTAAATACAAACTCTTTGTTACACCTATTGTGATTCAGTTTCTGATG
AACCTAATTCGTTAATTTTTTTTCAATTTTTCAAAATTGATTTTCGGTAATAGTCACGAT
CGCGTTCTAAGGTCAGGGTTATTACTGTATAAACAAAGTTTATTCGTCTAATTTTCAAAT
AAAATTATGCATACGACGAATAAGTTTGTTTCCACCACACAACGTGACCTTGTTATTTTA
CGAGATATATATTATATAGGTACAGGAGAGTACGCGGATTTTTGCACAAAAATTAACGCG
CCATTATAATGTTAATCGTTTTTCATTTAGTATTCGAGTGTTTTTTCGGTATTGTTCGTT
GTATTTGTTCGCGTTTTTAAGTGATCGGCGAAAGCGTCCTCGCGACGGGACGTCCGCGCG
TCGACTCACACGCGATAGGATTTT
(4104 bp)

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