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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp13912_c0_seq3
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		nesprin-1_isoform_X2_[Bombyx_mori]
Ontology
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005521 F lamin binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005640 C nuclear outer membrane
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0006997 P nucleus organization
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030017 C sarcomere
GO:0031965 C nuclear membrane
GO:0034993 C meiotic nuclear membrane microtubule tethering complex
GO:0040023 P nuclear migration
GO:0042692 P muscle cell differentiation
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0045211 C postsynaptic membrane
GO:0051015 F actin filament binding
GO:0090286 P obsolete cytoskeletal anchoring at nuclear membrane
GO:0090292 P nuclear matrix anchoring at nuclear membrane
Transcript
Level		FPKM:5.91 TPM:6.37
ORF EntryO_BomoOtmSK11437_complete:A_BomoOtmSK_comp13912_c0_seq3
Sequence
(Nucleotide)
CCCGCACGCGCGCCGCGTCCCGAGCGTCGTGCGCATGCGCCGCCACGTGCCCCCCAACCA
CGTTGAGCGACACCACGATCGACTTGTGCGAGTCAAGGTCCAGCAGGAACTCGCGGTGGT
CCTGTATAGCGTCTTCGAGTAAGTCGTATTGTTCAGGCGGCTCGGTTCTGGAAGCTTCCG
TGGCCTCGGCGAACTGCAGCCACTGCTCCAGCCGCCAGAGGTCGTTGTCCAGCTGCTTCC
AGTTCCGCTCCGAGCACAGCGGGCAGGTCAGCCTGCCGGACTCGCTCAGGTTGTTGATTT
GGAGCTCCCTCTTCTTGGCTTGCGTCAACAGGTCTTCGTACCGCAACGAGAGAGACTCAA
CTTCCTTCATCATGGCCTCGTCCTCGGTGGCGTCGCACTCTGTCAGCAGCAGCTCCGAGA
GGTGCTTGGCCAGCTCTAAGGTCTGTCCGGGCTTGGCTCCGGCTTTGGCGATTTCTTTTG
CGGCCGCGGCCAGTTCATCGCTTCCGGCGTTGTCTTTGAGCTGCTGCTGCAACGCGAGTT
CCAGCACTTCGAGCGCCTCCGAGGTGTCCCTCACGGCCGACGCCAGTTCAGCTCGGTACG
TCTCCTTCGAGGTGAGGGTGTCTACTTGTAGGGCTGCGTCCGTCTCCCATTTTAAAGTGT
CAACTTGAACGGCAGTGTCCACGTCGCCGACGACCTCTGCTCTGGCCAGGTCCAGTCGCA
ACCTGACATCCGCATATAAGGCGCGGTACTCTGCAACCATTTCAGAAACGCCTTGCGCTG
TTGAAACTTTAGCAGCCAAGCGATCGGCGTCATCCACTAAGGCTTGACATTCAGCCAGTT
CTTTTTCAACCAACTCTAGTTCTTTTAAGGTGGCCTCTTTGTCCAAGGGAGTGGGAGCAA
GGTGCAGAGCTCGGGTCAGTCTGACGTCGACTTCGGCCAACGCGACGACTGCTTTTCCGT
GTGCCGCCACAAACTGTCTGTGGACGTCTGCGCCGGCGGCGTCTACCCTGCCCCTGAGCT
GTTGCCAGCGACGGATCGCCGACCGCATCTTCGCAGCTTCGTCTGCCCCTTGGCCACGAA
GCTCTACGCCTCTTGCAGACGCCACGCGGCTGTATGCATCCTCTAACCGCTTGAGGTTGG
GTTCTAATGCTTCCAAGTCTTTAATTACGGCCTTCGAAACCGTTTCATCTTCATGTTCAC
CACGTTGTTTTCTGGTTTCAATTTTCTCAACTCTCTTCTCGATTGAATCGAGTTTCTTGA
CGAATTTAGGTAGAACAGACGAAGATAGTTCGGCAGATTTACGAATTTCTTTCAGCGTAT
TCTTGCGATGTTCAGAAGTGTCGCAAATATTTTTCCATTTCTTTTCGACGATGTCCACTC
CGGTTCTTAAGTTTCTGAGATCGAAGTTACCTTTGAGAACATCGGGGTCGTTGAACACAA
GATCGCAGAGATTCAAAGTTTCACACACCTCTCCACTTTCGGCTTCAATTTCTTTATGTG
TATCGTCTCGTTCTTTGAATTTCTCATCCACGCTCTTTGTCGTTAGGTATTCTAAGACAA
CAGTCGTTGTCAATTTCGACTCTATGACGTGTAGTTTTGTTCTGATTTCTGTAAGCCTCT
CTTCGAGCTGTGTTATAGTTTCTAATAATTCAGTAATTTTCACAATTCTAGATCTACCGG
TTTCCTGGAGTTTTCGCCATTTTTCTTCCATGTCCTTCAACTGCTTTGATGTATTTTTGC
TATATGACTTTTCCTCTTTCTTTGCTAGCTCTATAAGAGAACTACCGGTTTCAGAGAGCC
ATTCAAATTCACGTTCCTTCATAGCAGTTTCTGCTTGAACATCAGCGTTCAGCCTTCTGA
TCAAATCGTGAGGATCTAAAGCGGTGATGTCGCTGCTGCTACTGCCCGAAGTCTCTAAAC
GTTTTTCGACAGTTGTCATCCATTCTGTGAATCGTTTGAATCGCGTGTCAAATATGGCGT
AGATTTCCAGTCGTTCTTGAAGTCTGTGAATGATGATAGATAGTTGATGTTCAAGGTCAG
CGCGTTGTTGCCTCAGTTGCCATATTCTTTGGTTCACTATTCTCATATCCTGCGGGCTCA
AGCATTCCTTCAACTGTTCCTGGATGACGCTCAAAGCCTCAATCTGCGTTTCGCTCTTTT
CAATCTTTGTCCGTAAATCTGTATATTTATCAATAATTTTCTTGAGTTGCGGTCGGGATA
ATTTCTCCTCGTCAGTATATGAACTAATGTCGTCTTGTGTCTTTGAGTACATTTTGTGTA
AATCACTAGTCAAGCGTTCGTATTCACCGATCAGGCCTAGAATTCGAGTTAAGAAGTCTC
TCCAGGTGTTGAGGCTAGCTTGCAGATTCTCGACTCTCTTCACACTCCCGGCGTATTCCA
TTTTGACGGAGGCTCCATAAGCTTCCTCAGTGAACTGTAATACTTTCTTGAGATTGACTA
GAAGTTTATCAGACTGTTTGCGGCCCTCGGGCACTTTGTCAGCGAGATTCTGTATTTTGG
ATAAGATCTTGTGTATCCTCTTCATGTGAACGTATCTGAGTTGCAGCTTTTCTTTTTCGC
GTTCCATTTCTTTAAGCCATCTCAATAGTTCAGTGTAATTCTCTCTATAGTCGTCCCAGG
CTCCGATGCGGGCGCACACTTCATCGTGTCTTTCGACAATTCTCGCTAGGGTTTCATTGT
GGAGATTAGTAAGGGTGTCGAATTTGTCGGCCAAGTCCTTATTCTTAGTATCCCTGTTTT
CGTTTATTAGGACCGAGCGTTGCGAAGTGAGTAGATTTCTGTGGACCCTGCACAGACGTT
TGTGCTCAGTTAGGTTTTCGTAATCTGTTGGAACTCCGCTTGACAAGAACGACTGTAAGT
CGATCAAGTACTCGTGCCATAGTCTGAGCGCAGTGGCCGCATCACCAGACCTAACCAGGG
CGGTCGATAGCCTGTGGTAATGCAAGAATGTGTCTCTGAACATAGCCTGCCATAGTTCCA
AGATCCTAACGATCGAATGTTCTTCGGAAACGTCTCTATCGATGTCGGGCAGTTCCGCCG
TGGCTGGAGCGATGTCCGCTTCACTCTTACCCAGCGCGATAAGGTTTTCTCGTAACGCTA
TCAGTTTGTCTTCAACGATTTCTCCGTCTTCGTGCAGCGGAGCCAAGTCCTGTCTCATGT
CACATAGTTTCTCTTTGGCGTGCTGCGCTTTAGCTCGTGCGCTCTGCCGGGCTTCGCCCA
GATCCGCCAGGACCTGGACAGCGCCGGCGACCAGCTGCAGCCTTCGGGCCAGTGCGTCAG
CGTCGGCCTGTAGAGCCCTTGACCCAGTTTCCGCGGCGACTCTCGCTGCCAACGATCGGA
GTTCAGCTACTCTGGCTTCTTGTTCCAAGCATGCCTCTTGAAGTGACATTTTCGTATAAT
AAATCACACAGCGAGCCACTGACACATATTTCTTATCGCATCACCATAATAATAAAGAAA
AAACAAAATCATATCACACATTTGACAAGGACAGTTATAAAATATCACAAGTGATTAGCG
GTATTTCGATTCACGAGTTTTTAGCTTTGAATTGTTAATTGTCATGGTAATTTGAGGGTA
TTTTTGATTTGACTTTTATATTACTATTATTATTTTAAATACAAACTCTTTGTTACACCT
ATTGTGATTCAGTTTCTGATGAACAGGAGAGTACGCGGATTTTTGCACAAAAATTAACGC
GCCATTATAATGTTAATCGTTTTTCATTTAGTATTCGAGTGTTTTTTCGGTATTGTTCGT
TGTATTTGTTCGCGTTTTTAAGTGATCGGCGAAAGCGTCCTCGCGACGGGACGTCCGCGC
GTCGACTCACACGCGATAGGATTTT
(3865 bp)

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