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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp13898_c0_seq2
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		nuclear_hormone_receptor_FTZ-F1_isoform_X3_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003707 F steroid hormone receptor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
Transcript
Level		FPKM:1.19 TPM:1.28
ORF EntryO_BomoOtmSK11404_complete:A_BomoOtmSK_comp13898_c0_seq2
Sequence
(Nucleotide)
TGAAATTATACTAACATTTATCGTATAATATTACACATAGTTATCTCTTCTACTAATATT
AAAAACTGTTCATCAAATTTCTTCTTTTATAATCACAGACGCTTTCCTAAAATATGTATA
TGTTACTCTCTGAAGCGAACTAAAGAACAACAGAGAATGTAGTTTACAGAGTGCACTTAT
ACAATTCTGGAGTAATACGACATTGACTGCTAAATAAATTAACAAAGCTACACAAGACTG
GTGTAATATATTGCATATTATGTTATAGGTAGATAAATATTTGTTTAATCTGTATTGGGA
CTAGGCACGCGCGGCAACGCCGGCCGGCGCTCGGCTCAATAACTTATTTAATTTAATCAC
ACACCAAGCTAGTAACTAAAACTAATTAATAAGTAATAATTAATTATGTTCTATTTGTTG
TGGTGTCGTCTGCGCTTGGCGCTTCTCAGCTCTTCAACTTTATTCGTCACTGGTACTTCA
AGATAATCTGTCTAGAGTTGGTGTGTGCTCTGCACTCCGGTTTACCATTTCGCCTCCGTT
CGGCTTGCGTTTTGCGTGCAGCATTTCCATGAGAAGAGTCTGGGTAGGTGCCTGGCCTGC
ACAATGCCGCTGGTACAGGTGCTCTTCTCCCCGAGCCGCTAAAGCGTGTATCTCTGGCAC
TACCATTACAAGTTTTCCAAACTTATCCTGTATCGTTGGATAGCAGGTAAGAGTGTAGTC
AAGAAGGGCGGCTTGTACTGTTTGGTAACCTTCACGAACGCACTTCACGTTTACGATACC
CCTAACCTCGGGATTGAGAAGAAGCATGAATTTAACGCATATGTAATCTGGAACGTCGAA
TTTCAATTCTGCTAGTTTATTCTGTAATTCATTGAAGTGGTCGGCTAATGAAGGAACTCC
AAGTAGCCCCAAACAGAGCAGGTCAAACTTCTGCCCGTTGTGGAGTGTGGTCTCGTCTGG
CAGACCATTGTGCATTCTCTGGTGTAAATGATCCAAAACCAGCATAACAGACCATGAGTC
CTGTAGAAGTTTCATTTGGTCATCAACCTTTAAATACTTAAAGAACACTGTGTTTCTTGC
CCAATCCACTTGAGAGAATAAATTTTGGTCCAGCACTTTGCACATTAACTCGAAGAGATC
TACTTCGCACTGGTTATATGTTTGGCTTTGTAAGAGTCCGAACAGTGCATTCTGCCACTC
GCGGTCATCGACGGTTTGTACGAATTCTCTGATCATTGGAGAAACTCGTAAAGTTTCAGT
GCTAGTAGCTTCGGCTGTGCTGGATGGTGTAGCGGCGGTGTTCGATTGTGTATCGAACGT
GAAAGCATCCGGCGACGCCGAGTGTGGTGAGTGGGCTTCCCACTTGTCGTGAGTTGGTGG
TGGAGGTGGCTGCGGCGGCTGTGGCTGAGCCCCAAGGAGCGCTGGTCCCGGCGACGACTC
AGGCGAGGACGTCAATGATGATACTTGCGGAATCTGTATCTCTTGTTTAACGGATACAGC
TGTGTACGGAGAACCAAAACCAAGGACTAATCCACCGTCCCCTAGAGAACCGCGCAGAGT
CTGAACGGCGATTTGTCGCTGACGCATCATTTGTAGTTTACGGGCACGGTCTCGTTTGTA
CATAGGGCCAAATTTATTGCGACCACCGCGCATACGATCTGCTCGAACCGCTTCAAGTTT
CATGCCCACATCAAGGCATTTCTGGAAACGGCAAAAGGGACAGCGTTTCCGTTGAGTTTT
GTCTATGTGGCAGGCTCTTTCGGCGACGCATGTATAAACCTTCTTGTTCTGAACGGTTCT
TTTGAAGAAACCTTTGCAGGATTCGCACGTCAGCAATCCATAGTGGTAGCCGCTGACTTT
GTCTCCACAGACGGGACACAATTCTTCTATTACATCCTTGGTATCAGTTTGGTCGCAAAC
TGTTCCTGCTGTCGGCAGATACGCTCCTGGTTCACCTCCAGTGCCAGTTGTAGGATCTAC
GTAGGTAATTTTCAACTCCACGTTGGTTGTTTCGATAGATTTTGTCTCCATAGAGCTCAT
GGCGAATTCCAGGGGAATTTCTGTAACGATATCACCTTTTGGCTGGCTCGTGGAGGCGGC
CAGACTTTGCGCTATACTCATTTTTGGAGCGTCTTCGTGCATTATACACGAATAATCTGA
CGAGGCGACCGTATTTTATCGCCTACAAATTCTACGATATATATTAGGTGTCTAGGGAAA
TATTCTATTTAAAAAATCGTCCATAAAGCGATTTTACGTTTCAAAAACAAAATGTAGGTC
TCTAGGCCACTTCACTTACACTTTGA
(2306 bp)

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