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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp13897_c0_seq1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101743043_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005776 C autophagosome
GO:0005829 C cytosol
GO:0005930 C axoneme
GO:0006914 P autophagy
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0008285 P negative regulation of cell population proliferation
GO:0021915 P neural tube development
GO:0030154 P cell differentiation
GO:0031410 C cytoplasmic vesicle
GO:0031625 F ubiquitin protein ligase binding
GO:0043524 P negative regulation of neuron apoptotic process
GO:0043552 P positive regulation of phosphatidylinositol 3-kinase activity
GO:0045335 C phagocytic vesicle
GO:0061734 P parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:1903599 P positive regulation of autophagy of mitochondrion
GO:2000785 P regulation of autophagosome assembly
Transcript
Level		FPKM:3.71 TPM:4.00
ORF EntryO_BomoOtmSK11400_complete:A_BomoOtmSK_comp13897_c0_seq1
Sequence
(Nucleotide)
TGTATTTGACATATTGTTAAACACGACAAAAAAACAATTTATGTGGATCTTTAGTTTTGT
AAGTACCGTACTACCGTTGATTAGGTTGGATTCAATAATGAAATATAGCCAAAAAACTTA
ATTTTCAAGTCAAACTACTAAAGTGAACAATTATACAAAAAAAAATGACATTCCAATATG
GCACGCAGTCGTCCCGGTCATAACAAGTAAGTAGTCATATAGCAGTGAAGATAAAATCCT
ATGTAATTCTTTTTCAGTAAACTTAACGTCAATATTCAAAAACTGAAAGTGAATAACAGG
ATTACATAAGCTATAAAACTACTATATGTTGTGACAATAAATGTTTTAACAAAAATGCGT
TTTAGGAATATAATTTCTCTGTTCGTTTTGTTTTAACCTAAATTATGATACACGTCTGCG
TTTGGGTTAAAATCTCAATGCACAACACGAGTCCTTAATTGTATGGACAATGGACCCAGT
GATTGATAATGAATGGCTCAGCATAAAGCATGATCCCGTGGAAGAAACTCCAGTTGTCGG
CAATGTTTCTCGTAGTTGGCAATGGCGAGAGCTCGGAGCGAATCCACCACACTACCCTGC
AAGCAAAACAGTCCTAGAAAATGCTGCTGAAGATATTTTAGTTCAGAAACCACTGAAAAT
TAGAAGCTGCGACCTACCAGGATATCCAAGGTCAACTTTTTTGATGGTTTTCAGTCCTGA
TGGGACAAAAGTTGCATCAACGCATGGAAATCATAATGTGTATGTGTCTGATTTGGCTAG
TGGAAAACACCTTAAGATTCTAGAGGGACACCCAAGAACACCATGGTGTATAGCATTTCA
CCCGTCACATACACAGCTTATAGGCTCTGGGTGTCTTGGTGGTCAAGTAAGAGTTTGGGA
TATGGGAAGTGGTGGAAGTGAAGTGTGGAATGTTCGCTATGAAACAGTGATAGCTTCTAT
TGCATTTCACCCTCGTGAACAATTACTAGTAATTGCTACTTACAATGAACTATACTTTTG
GGATTGGAGTCATCCAGCACCATTCACCAAAGTTACCACTAATAATATAAATGAAAAAGT
GAGATATGTTGCGTTCGATGCTCTTGGTTACAAATTAATAACTGGAATATCTGTATCGGG
TTGTCCGAGTATGTCTAGTACTTCATTGCTGCAGCAAAGTCCGACAACAGGCACTTCTAA
CACACAAAATAGCAGTTCTAATAGACGGAACGCCACAGGCAATGCCAATGAAAACCCGCT
TGGGATCAATCCCCCAACGGACAATGCTGGTTCAGCACAAGACATGATTGTAAATTCATA
CCAGAACCTGGTACAAAGATATGACAGTCTAGTAAGGAATTATCAAAGGCTTTTCATGGT
ACGGCATCGGCTTTCCAATTCTTCTCAATCAACTCCAAATACGATTGATCGAGGAACTGA
TCCTATGGAAACCGATACATCCCCTGGAACGTCCGGCTGGAGCAGACCTGCACGACCGTC
TACAGTTACAACGAACGCTGAGGATGGGGCCAGTACCAGCGGAACGAGACGTCCAGACAG
TGGTGAAAGCGGTGATGGAGAAAACAGTAGTCGCTTACTCAATTTAGATGCTTTAACGTT
TGACAGTGATCCATCAAGGAATCAAGATTCAGTTTCTGAGCGTTCTCCATTTGGGTCCCG
TTCTTCAGCTTTCCAACCGTTAAATGAAACCGGCAGAACATTTAGACCATCCGACCCGAA
CGAGCGCTCTACAAGATTATTACCCAACCCCTTTTCGTCCCCCGGAGGCATCTCGCGATC
GGCCCGAGTTAACTTCGGTGAAATGTCCACATCTGGCGACAACGACCCGGCGAACGCGTC
GCGCACCAGCATTTTTACCTCGTCGAGAATGAGTTCCACGGCTGGCCGAGTATTAATTTC
GCACAGACGGAATTTCTCGCCGATACGACGCGGGCGGATCTCGCTATGGGGTGACTCGCC
GACTTCCACCGAGAGCACTCCTACACCCTCTCCTCGAAATATTACGAATTCTTCCGCAAA
CGAAGAAACGCAGGATACTACCGCACCACGCAGACCTACTATGACTAATTCTTCGACGCA
AATGAGTCCCGTACCACCCCTGGACGCGGAGGCCCTCAACGAGAGCTTGGATCTAATTCG
GGACATCTTGCGCGATTCCGGAACGAGGCTTTTAAATTTGATTACGGACATGTCGTTGTC
GATGGTATCTGCCAGCGAACGGGAGCGACGACGTCGCGCTCACTCTGACGAAGGCTCGCC
CGTAGAGCGCCGACCGCGGCCCCGGCCCCGTCTGCTAAGTGTTGGCTGGCGTCGAGAACT
TCTCTCTTCCAGTTCCGACTCGGACAGTGATCGTTCTCTGGAGCCGGATGCTCTTCGCGC
TCGCAGCACTGGTTTCAGAGATTCCGTCGACGCGGCCGCTCAGTCGGCAGCTTCGTTGTT
GACGAACCTCCCGACCGACCGTTTAATGTTCGATATCTTGACCGATCGAAACGAGAGCGC
ACCTCGCGATAACGAAGGACTCGACCCCACTCGTTCCGATGATAGATTCCGCGTGCGTGG
TCGAGACGACGAAGACGTGGCTCGTGTAGTTCCCGAACCGACTCCCGCAGCTTCAGAACC
GGGTCCATCCGAAGTTGATCCTCAACCATCAAGCTCCAGAACCAATCCGTCGCCACCTTT
CAGTCGACCTTCAACGAGTAGAGATGAGTTTTGGACGCGCGGATCCTCGGTGTCGTCGGA
AGAGGCCTATCGTAAAGTAAGGAACGGGGTGGCCGCGTTGCAGAAACACACAGTGCATCT
GGCGAATTTATGGTATCGCGGAAATCGTATTTCTATGCGCGAACTTCGCAACTTGTGGGA
AAACTTGCGCCGTCGTATTCTTGCGTTGCAACGAGATATCGGAAGACAAGACTCCCCGGG
TTATTACACTAGATCTCTTTTGGAGAGATGTATGATGTTAGCAGATATCGCAGAACCTAT
TTCACGCCCTCCAAACAGAAACTTGAGGCGAAGTATGGATAGCGATAGAAATGGTGAAAG
AACGGATCACTCGTCAAACGTTGATATGAGTTCACCGAATCGCGGTGTAGCGCAGGACCC
TTCGAATACTACTTACGCGAGAGAAGAAGTACAAGCTCGGGCGGGGCGAAATACACAGAC
AAGATCGCAACATCCGGGAGGTCGGGTGACTACGGCCCGAAGACGAGTTCAGCCGGGCTA
CAGGTGGCAACCTGAGGATGAACGCAGACGACGTTCGCGTAATATCGCAACAAATCGTTT
AGCGCAAAGATATTCAAATAGATCAAGACGAGAATTTACCCGAGCGATAGAAATTAGCGC
TACCAAACACGAGTTACGTATGCGAGCGATGCAAGTATTATCTGTGATGTTCAATATGAT
GATGATGTGCTTGGAAGAGCGAGGTCTGAGTCAATTAATCATCATCATGCTTCGAACTCT
CAAGAAAGCTTTGGTACTTTCGTGGTTTATGGTGATGACGAATAGAAATAGCGGACGTAC
TGGTAACGGCCCAACACCACCATCGCAGCGCACGGACCCAATGGATGTCGTTCACATACA
AAACGAAGATGACGCAAATCCCGTGAACGTAGATGACCATGAAGATACCCAAGTGGCCGA
AAATGTTGTTTCGAATACAGAAGTTGTAGACAACACACAAACAATAAAAGAACAAAAGCG
TGAACAAGAGTCTCGAGACGCCACAAAAGCATCATCCTCAGTAGTTAAGTCTGAAACACC
GAATAACCAACAAGACCAGACAAGACTACCGTCACAGAACTACAGATCATCGAGATGGAG
CAACAGACTTGCAGTGCAGATAGCCGCTGCTAATAGAAATAATTCTGCAACAGCGTTGAG
TAGAAGAGAACTTTACATAGAAAGCAAACGATTAAAAGCCCTACACAGAACAAATCCTTC
CGTGCATCCGCTAAATAAGAAAAGAACAGGTCCCCCGATGTCGACATATAGGATTCCGAC
ACTCCGTTGTTTCCCACGTCGCCCTAATATGAACAGACCGAACACTCCCCGATCACAAGA
AACAGATCCCATCCCGGGACCTTCAAATTTGCTTCATCCAGAAACCTCTAGTCAGGACCC
GCCACGAGCGGAGGGCATGTACGAATTTTATCAACGCGTTAATTTTATACGAATAGCTCA
CATGCAGGCTGTGAGCCTAAGAAACGCCGCTAGAAACAGATTTAGGCGCTTGCAAACGAT
ACGCCTATACACGCCTTCATCGGTGCGGGAAATGTTCGCTCTTTATTCGAACAATCCAGA
AAATCCACCAGAAAACCGACCGCCGCCACAAAGCAACCCCGAATTGGGCAGCCGTCGACA
GTTTGCCGTGTACCGACCGCATATCTTGGCGCAACGAATCGACCCCGCAAACGCATCGGA
GGAACCCCCTCAGTTCAACAGTGTTGCCAACAACGCAGCGCCACCACCGCCGCCACCACC
ACCGGCGCAAGCACAGGACGCACAGGCGCAACGAGATGGCCAGAACGCTCCGACGCAGAG
GCTGCCGAGAATCCACGAATATTTGCAACCGATAATTTTAGCCCAGAACGCGATGGTGGT
GGAAGAAGAGGGTGGTGGGCCGGGCGGTATGGGGGGTGCGCGGCGACTGGGCGGCATGGC
GGGGCTGCTCGACGCCGGCATCATCTCGGAGACCATGCCTGCCTCCTCGCACCGCGTGCA
GGCCTGGGACTTTACCACGGGAAACGTTCCTGAACTAGCCGACGGCAAAAAAAATGTTGT
AGTCCAAAGATGCAGAATTCATAACGACGCGAGCATCGACATTTCAAAAGACGGCAGACT
GCTGGTGGCGCTGCTTCCCGTTCCCCGCATGAGAAACACAAATCACTGGCTAGGGGTGTA
CTCGCTGGAGTGGGGTCGCTTGGGTCAGTGCCTCCACACGGCGGTGCTGGAGCAGACGGC
CGTGTCGGTGGCGCTGTCCCCCACGGCGCGGCACCTGGCCGTGGGACTGGGCTCCAAACG
CTTCACGTCCACGCACCGCGCCCACAACCATGTCTTCGCTCTCCTGTACAAGCTCGACTC
GCTCGATAGCTCCAGTCGCACGGGACTGTCGCCGATCAAGGAACTGGAGCAGAACTGGGA
GCAGGGGTTCACCAGTCTGAACTGCTTGCGGTGGGCCCCCCAGCCCGGCCAGGGTCTGGT
CTACGCCAACAACGCCGGACAGCTTATCGTCATGAGCTAAGTCGATAACATCCTGAGGCT
TTTGAGTGCCTAATTTATAATAAATCCACATGAAAACTAACAAGTAGGAACAGAAGAGAA
TAAATTTAGACGTGTGCCCTGTTTCAACGGTTCACGCTCATTTGTCTTAATAAATTTTTA
CCCGATGTTACATGAGCACTGTGATTAGAACTCTCAACTCGCGTTGTACGAAATGACGTT
GCAAATGTCGACTCCGAACACGGATGTTGACGTTGCCACACGCGACAAGGGTACAAGTGG
CGTAGTGAGAGGGGGCCAAACGGGGCAAGGGGGGCCTCATGTTCCGGGTACTACTCACAA
AAGGGCGCCAAATGGTCCTCAAAACAAAAAATTATTGAATTTTTTTTTTTTCTTTTTTTA
TATATTTTAAATTTAGTACCTGTCTAATATAATAAATGTTAATTCGTA
(5688 bp)

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