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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp13895_c0_seq5
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		DNA_repair_protein_complementing_XP-G_cells_isoform_X2_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0009408 P response to heat
GO:0010213 P non-photoreactive DNA repair
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:0.40 TPM:0.43
ORF EntryO_BomoOtmSK11397_complete:A_BomoOtmSK_comp13895_c0_seq5
Sequence
(Nucleotide)
CTTCCTATACATGCATTCTACATTATTCACTATCAGTTTCTGAGAGTTCTGCATCGTTTT
TTGGTAATATAACTTTCTTTTTAAAAGCTTTTTTCTTGCGATCGATTTTGGTCTTCCTGA
ATATTTCAATAGCCTTCAATTTATTCTGCAATAAGCTCTGTTTCTCTTTCTCTCTCTGTG
GAATGATTTCTTGAACTCGGTCCGTTTTAGGAATTTGTATTTCAATTCTTTTCGTTCTAC
CTTCACTGGTTTCTGAAATGACTTTTACCCCCTGACTAATGAGGAGCTTTTCTTCTAGAT
TTTTCTTCAACTTAGGCTGTGTAGGGCCTGATTTATTTGATTCATTTTTTATTTTCTTTC
TTTTCTTAGCAATTGTTGCCTGAACTTGTGTACTCGGAATAAGGTCTTCAAGTGTATTTA
ATATATTCGGTCCCATTTTCTGTACCGCTGCTTTCACCCTTTTGCTCATTTGATCCTCCA
AAGATTGCAAGTTGACATTTTTCTTGAAATAATCTTCAACTGACCTCTGCAGTTTCTTCT
CTTGCATTCTTTTTAAAACTGGTTTAATTATTTCGTCGAGTTTATTTTGTGACCAACCAA
ATTTCTCTTTTGTATAATCTCGAAGTATTGTGATGTCTAATTCACCCCATGTAAATTTTT
CATTACTTTTTTCAACATTCGGTTCTAAGTATGCTTGTACAACGCGAACGCTGGGAAAAT
CTTCGGACAAATTCACATTCTTCAGTTTTTTCTTTAAGCTAATATTATCTGTTCTTCTCC
CAGCACGCACCCACACCTTAAATTCTTGTAAGCCAGCCACCATTTCGGCATATCGCGATT
TCTTAACGCTTTCATTCAATTGCTTTTTGTTGAAAGGAAAAGACGCTAAGATTTCTAGTG
CGGTGACTGGACCTACTCCAGACACCCCGGTAGTGTAGTCACTGCCCACTAACAGAGCTA
GTAAAACAAGCTGCTCACGACTTAAGTTATATGATTTTTCTATTCTGTCAGCTAAAAACT
GTAGAACATGTTTCTTTTGATTAAAGAAATTTTTGTACACAGTTCTACCCCCAAATAGCC
AAATATCACTATCATCTGTGATTGTTCCGTCAGTTAGATTAATGGTCTCAAGGAAGGCAC
ACTGTGCCTCTGCTTCCATTGGTGCGACGATATAAGGAATTCCGAATATTTGCAGTAACT
CCTGAGCTTCTTTAGTCATCTGTTCTGTTATGTTTCTACCAACACGATCTAATCGACCTT
TCTCTTGTATTAGAGAATTTTCTTTTGACTGAATCTCAGCTACGATTGTATTCAACTTTT
CAGTTGATATCGGCTCTTTGACTACAGTTCTCTCTTGTAAAAGTTTCAGATTTTTGTCCG
AATTAGTAGCTTTTTCGTCATTTTCGTGCTGAATAATACAATTTACTGTTTCATTTTGTA
AATTAGTCTCTACTACTTCTGTGCTCTCTTTTCTAAACTCATTTTTGGTCGTGTCATCGG
TTACAACTTTTAATTGATCGCGTATATCACTTTTTAGTTCATTGCGCCCTTTTTGTTCCA
CTTTTTCAGTTTCCACATGAACATCTACAGCCTCTGTATTCTCAAAGATATCTGCAAACA
GATCATTCTTATCTGGTATAGTATTGGTATTTAATATTAGTTGCACAACAGTTTTGGGAT
TAGAATTTATTTCTGGCACGTCCTCAAAATCGTCTTCATCCGATTCAGAATCCTTGGATA
TTTCAGGATTACGTTTATCAGTGTTTTCTACATCAAAAGATAAAATATCCTCATCAGAAC
TGTGAATACAAATTACTGAGGATTGCGAAGAATCAATAGCTTTTATTGGCATTTCTTTTC
TTTCAATAATATCGATATTTTGTTCTTTATCACTTACATTCAGAACTGTAAGCTGACCAA
TTTCTTTGCTATCCTCAACAACACCATCAGCAGCCTCTACTTTATGATTTTGTTTTAATT
CTACACTGAATGCTTCTACTGCAGGCTCTTTGTCTTTTTGCACAGGAACAGTTTCAGCAC
AATCTGAAGTAAGGTCAATATCTTGAACTTTATTGTCTTCTTCAGATGATATTTCTAATT
TACTTTCAATTAATGCTTTCTCTCTATTTATTTCTTCTAATATTTCATCTAATTTGGAAG
CATGAGCTTTATTTTTATTATTACTTTTTTCTGAAACAAGTTTTTCAATAGCAATATTAG
TGAAATCACTATACTGCATGATATAAGCTTTTGCTGTTGACATATCTGGTACTTCATATT
CATCTTCAGAGTCTGAATAATCTGTATCAGTTAAACAGGATGTCCAAGAATCATCAGTCT
TCGAATTATAAGTAGCTGTGTCAGTTTCATTTACACATTCCATAGACATTTTAATGGCCA
TCTCTAAATCACATTCAAGTTCATCTTTAACTGGTGACTTTTCTTTTTCAATATTTATTT
CTTCTACCCTATTACTCGTGCTTGCTTGATCTTTGGCGTCATTTCTTTGCTTAGCTTCAG
CTAAAGCTTGCTTTATGTTATTTATAAGTAAGAATCTTGTATTATCATTGGACGCTATTC
TTTTTGTCGGTAATGTATCAACATTAGTATCAATACCTTCCTCGTTAAGTAGTGATTCTA
AATCTTTTAATGACATTCCTGTAACACCCATTTCTTTCTCAGTTTCTTCAAAACATTCCT
GTAGTTTCCTTCGTTTTAACAATCTTTGCATCTAAGTGAAAGAAAAGAATCAAATATGTT
AGTTATTGGGACAAAAAAGTAATTTAGAAAAAGTAGTAGTTTTTGTCTCATGTATGTTTC
AAACACATGAAAAATTCTTGCTCGAGGCCATTGAATGTAGAACTTTCTTTCAGCTACTTT
ACTTACCTGGAAATCAGAAAAACTGTCACTTTTCTTTGGTAATTCATGTAATCTTCCCCA
AGAATTCATTTTTCTTGTTTCTTTTAACTCTACAAGTAGATCATACTTCTCTTTAAGGGG
CATGTTTTTGAAATGTTCAGAGTTTAGATCCATTGAATGTAGATCAACAGAGGAGCCACT
TGAACTTTCTTCCTCAGAATCTGATTCACTCTCCTGGTTCTTCTTCGGGAGTTCTGGCAA
TTTGAATATATTATCTTCATTTTCAGTTTGAGCTACATTCTTTTTTTGGTGAAATCTGCT
TACCAAGCAAACTGTTGATAGCAGTTTTTTTGCTTAAAAGTAGAGCTAATTCTCTCTTTA
TTCTTTCAGATTCTGAATTATATTTCACCTTGTGATCTTGTCTTTTAGAAATTGTTTCTT
TCTTCAAGTCTGGAAAGCCACCATCAAATACGAAAATTGGTTTTATCCTGAAGTAGAGAA
GTTTGCAAAGCCGTTGGAACAAGCCCATCAAGTGAGCATTTGCTAAAGGGGCTCCTTTGG
CATCTTGGTAACCTTTCACCATCTGGTGCAACCATATTGAGATGTCAACAGCTAAAACCT
TATTTTCCAACGTTTCTACTGGAACTGGCTTTCCTGTCGGTTCAATCAACCGCCACAATC
CAGTGACTCCCATCGTTACCGATAAGAGTAGCTCCGACCGAACTTTTTTTGTTTACACTA
ATGTATATAAATATAAATCAGAGTACATAACAAAGGTCGTTTCCCACGGGTTCTTCGGTC
AATCGTCGCTCTCTTCCTCACACATTGTAACTTTTCAACATATGAATCACTGTTTACTAC
ACACACTATCAAATGAAACTATAATTTGAGTTAGTGGAGACTGGGTGTTTTACTAGTTAC
TACACACGCTGCGACCGCCGACCGCCTACTCTTTCCCACACATTATTTTCTCACGCCCCA
CGCGGCGTAACCCCACATCCTACTACGACCGTCGGCGGCTTTCAGTCAGCTTCGTCAGTC
GGTCTGCTTCGCATTCGAGGATTTCATTGTTGTTTCGCACGCGTAGATATAAAATATTGG
AAAGCAAATTGCTTGCACTTCAGATTGCTTAAACGGTGTCTATGTCAATCTATCTATGGT
CAGATTTGACAGATCGGTATTTGGCGTTGTCGGACGTAAACTTGAGAAATAAACAGAAGT
TTGATAAAATCGTACATTTATCAAGAAAGCGGAACAAACGAAATTTAAACAAATACAAAA
GTTCGCTAACAGTTTATCAAATTCCTTTCTTAAACTTGGAACCGGTAAATTTAGTGACTC
GTCTGAAAATTCCAATGTTGAACAGGTGTTTTTGAATGAAACGTGTGCTAGTTCCCACCG
TAATTAATTTTTACTGGCGTGAATAATATAACAGAAAAAGGGATCGAGCGACTTCCCAAT
CGATTTACAAAAGTGCCTCTAATCAAGCATCCAGTGCCACTGCTGTAGTGTGCTACAGAT
CCTCTGTTATGGAGATGTAATCATGGTGCCTTGGAGAAGAGATCACTCCACATAGTTTTT
CAACAATGCCGTTGAAGATATGAGGGTAGGCTGATGGTGATTTAGCCGTGGCTAGCATGC
CGCACCAGTACGGCGGCGGCGCGGGCGGCT
(4530 bp)

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