SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp13895_c0_seq1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		DNA_repair_protein_complementing_XP-G_cells_isoform_X2_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0009408 P response to heat
GO:0010213 P non-photoreactive DNA repair
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:0.98 TPM:1.05
ORF EntryO_BomoOtmSK11383_complete:A_BomoOtmSK_comp13895_c0_seq1
Sequence
(Nucleotide)
CTTCCTATACATGCATTCTACATTATTCACTATCAGTTTCTGAGAGTTCTGCATCGTTTT
TTGGTAATATAACTTTCTTTTTAAAAGCTTTTTTCTTGCGATCGATTTTGGTCTTCCTGA
ATATTTCAATAGCCTTCAATTTATTCTGCAATAAGCTCTGTTTCTCTTTCTCTCTCTGTG
GAATGATTTCTTGAACTCGGTCCGTTTTAGGAATTTGTATTTCAATTCTTTTCGTTCTAC
CTTCACTGGTTTCTGAAATGACTTTTACCCCCTGACTAATGAGGAGCTTTTCTTCTAGAT
TTTTCTTCAACTTAGGCTGTGTAGGGCCTGATTTATTTGATTCATTTTTTATTTTCTTTC
TTTTCTTAGCAATTGTTGCCTGAACTTGTGTACTCGGAATAAGGTCTTCAAGTGTATTTA
ATATATTCGGTCCCATTTTCTGTACCGCTGCTTTCACCCTTTTGCTCATTTGATCCTCCA
AAGATTGCAAGTTGACATTTTTCTTGAAATAATCTTCAACTGACCTCTGCAGTTTCTTCT
CTTGCATTCTTTTTAAAACTGGTTTAATTATTTCGTCGAGTTTATTTTGTGACCAACCAA
ATTTCTCTTTTGTATAATCTCGAAGTATTGTGATGTCTAATTCACCCCATGTAAATTTTT
CATTACTTTTTTCAACATTCGGTTCTAAGTATGCTTGTACAACCTGCAAAACGTTATTGT
TACTGTCAACCTCTTAACACCATCCAGATTGTCAGTTTGTTAACCAACGCACATAAATGT
AATAATAATACTACCAGTCTACAAATATGCCGTGCCAAAAGTGGCGATTTTTAATTGTAA
CAGTATTTA
(849 bp)

- SilkBase 1999-2023 -