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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp13890_c0_seq1
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_vacuolar_protein_sorting-associated_protein_54_[Bombyx_mori]
Ontology
GO:0000938 C GARP complex
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006896 P Golgi to vacuole transport
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0007286 P spermatid development
GO:0007291 P sperm individualization
GO:0015031 P protein transport
GO:0019905 F syntaxin binding
GO:0030154 P cell differentiation
GO:0042147 P retrograde transport, endosome to Golgi
Transcript
Level		FPKM:4.28 TPM:4.61
ORF EntryO_BomoOtmSK11378_complete:A_BomoOtmSK_comp13890_c0_seq1
Sequence
(Nucleotide)
ATTTTTTTGCCTAAGTTCAAGTTTTCTTAGAGTCAATATTCGAAATTCATAAAGAAAAGT
GTACTTATACATACAGAAATCAATCTATACTAAAAATGTTATGGAGGAAAATTCATCATC
AAGCACGAATCCAGCATGGCAAAACTGTTCACACTGCCCCAGCCTTGTTTTCAGCACAGC
AGCAGAATTTGAAAGACATATACTAGATAAGCACTCCATAAAAGAGGGAACCATAATCCT
TTGTCAATATGGACAAAATGGGATGTGCTCTGCATTACAATTTGGAGATTTACGGAAAGC
TGGTTTTAAGTACCACATCCGAGAATATCATACATATACCAGGACACCTAATGAGTCTTG
GACATTCTATTCTTCTTCACAAAATCTCCCTGCAGTACTGAATGATCCGAATAGAGGTAA
GCAGAGCAATTTCTTCACGAAAACATGGGGTGACAGCTTTGTGGATAAAATTGATATACT
TCCTAGTCCTTATTTACCAGATGTAACATTGACACATTTTGAATCTTATTGTAAAAAAAT
TGCTAAGAGGTACCGAAGACATTTAAGACTAAAAGAAAATTTGCCAGTTAAAAATAAAAC
TGCAATCATAGAAAATGATTGTGAAATACCAGATATATTCTATGAACCAGGTTTGCCATT
AAATGATCCAGTGGTTTTCAGTAAAGTTTTTCCAAACCTTTGTAGTTCTGTAGATAATGA
TGTAGCTATAAGATCTCTGCAAGAAACATTGAGCACTTATCTGGATGTAATAGAAATGAA
TATTTCAAAGCAAGTAGCACAAAGATCAGATGCATTTTTTCATGCTATGCTTTCACATGA
TACAATAATGGAACAGATGGCAAAAGCTGTCAATACTGTTCAGAAAACAAGAAAACATAT
TAACCAAGTTAAAAAGAATCTGACTGAATGTCCATTGAAATTAAAAAGCTTAACTAGGAT
AAATTGTAATCTTGGTCATGTTCATGAAATTCTTAAGCTAATGTCAACAGTACAACAGAC
TCAACCTATGATTCAGCTATTACTCAGTACATCGGATTATGTTGCTGCATTGGATTTAAT
AGGCTCTACACAAAAAGTATTGTCAACTCGACTTACAGGCATACAGGCATTTAGACACTT
ATCTCCACAATTAACTGAAATGAAAAGGTTAATTCATAAAATGTTAAGTAATGAATTCCT
AAAATTCATTGTATGTGACTTAAATAGACCACTAATAGATGAAAGTGACATTCCTGAAAA
AGATAAAATTATATCAATTGTTTCTGGCATTCTTCGTCTCAAAGAATTTGATTTTCTAGA
CACATTTAAAATGGAAGCTATGACATCTATTCAAGCTACAATAAAACAATCAGTAATTGA
AATTATTTCACAGCGAGATGGTTGTTTTGAAATTGTTTTAAGAGGATCAAATGCAGATAA
CATGTGGCTATTGTGCAACGAAGGCATTTTATTTTTGCAAAAAGTGACTCCAAACTTAGT
TATGTTATTTAAAAGAATACTATCATTAACAAATTTGATTATAGATGTAAGTCAAATGGA
AGATGTTAATGGGAGTGATAATGAAGAGATTTGGTCAGCTGAAGAATTGACATCTATTGA
AGACAAATTGAAAAAAATGATTGTTTCATTGTCAGATTACTGCAATGAAAGATGTGCTAA
CCTAATTGTAACTAAAACAGACAAAGATTATGTGTGTTCTGATATGTCACAGTTATCTCT
CCTATCAAATTTGATTAAAGAATTTTGCACCAAATGTGAGGATGTAACCGGATATTGTAG
TAATGCCATGAATTTGGCTCTAAGGAGCTTTGCTATGAAGTATATACAGACACTTCACAC
TGAACGCAGATCTCAATTAACAGCTTCTCTAAATGCTGAACGATGGAAAACTGCAGATGT
TCCATATGAATTGCAAAGTGCAATCACAAAAATATGTGAAATTCAAGAAATACCTCCTAA
TTTACTGTATGAAAGTGGGAAACCAGACGGAAAATATCTTTTTATAAACAAAGAAAGCTA
TGCTCTGGTAGGGACAGTTCAACTACTTATAAAAATTTTATTGGAATACTGTGATGCAAC
CAGACAATCTCCCATTATAGTTCAGTATTTAGTTCATTGTATGTTAGAATTATTAAGATT
GTTTAATTCTCGGTGCTGCCAACTTGTTCTCGGTGCAGGGGCAATACAAAGTGCTGGACT
TAAAACTATTTCTACATCCAATTTAGCTCTAGTATCTCGATCTTTACAGGTTATATTATG
GTTTTTACCTATGATAAAACAGCTGTTAGAGAAAATACATTCTTCTGAGGTATCATTGAG
CGGTTTTGTTGCTATTGAGAGTGATATTGCTAGCCATAAACAGGAAATAGAAAATAAGAT
TTGCTTAATTGTAAGTAATATGTTATGTTCTCAATTAACAGGGTGGGATGCAAAGCCCCC
AGTTCCTTCTCAAACATTCCGCAATATTTCAAAACATTTAGTGAAGTTACATGAAGCATT
AATTGATATTTTGCCACCTGAACAAATAAAGTTTATATACAAACGAGTACATGATAATTT
TAAAGATAAATTAAGAGAACAACTAATTAAAATGAATATAGTTGCTAATGGAAGCCCCCA
ACATGGTGTAGTGACTTCTGAATTGACATTTTACTTACAAACTCTAAAGACACTCAGAGT
TATAAACGATAATGATGCAGAAGACAATATACTATATGACGTTTGGTTAAATTAACTTTT
CCAATATTTTATGTAAAGAAAACTATCTATTTATAAATATTACATTAAGTCATCACTTCT
ACTTAAAATACTTTATGATGATGAAATATTGTTCTCAAATGCAATTGTAGAAACAAACCA
AAA
(2883 bp)

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