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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp13865_c0_seq1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		RB1-inducible_coiled-coil_protein_1_isoform_X1_[Bombyx_mori]
Ontology
GO:0000045 P autophagosome assembly
GO:0000407 C phagophore assembly site
GO:0001889 P liver development
GO:0001934 P positive regulation of protein phosphorylation
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006914 P autophagy
GO:0007049 P cell cycle
GO:0007254 P JNK cascade
GO:0007507 P heart development
GO:0010506 P regulation of autophagy
GO:0016236 P macroautophagy
GO:0019901 F protein kinase binding
GO:0031965 C nuclear membrane
GO:0034045 C phagophore assembly site membrane
GO:0043066 P negative regulation of apoptotic process
GO:0045793 P positive regulation of cell size
GO:1990316 C Atg1/ULK1 kinase complex
GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
Transcript
Level		FPKM:3.27 TPM:3.53
ORF EntryO_BomoOtmSK11284_complete:A_BomoOtmSK_comp13865_c0_seq1
Sequence
(Nucleotide)
CGAGTTAAGAAATGGTGGTGTTTTGCAATACATACAAAGAAAATGAAATAAGTTGATTTA
GAATATTGTTTTTCTCCAATAATTTGTTGATTAAAATTATGAACCATTTTTAATCACTAC
AAAATGTAAAATTGAATAGCAATGATAAATCAATCGAGTCATTACGGTAGACTACAGTTG
AAGGGTATAAAATATACAGGCTTATAAAATTTTGAAGTGGTTTTACTAAACAGTCAAAAT
GTTGTATGTTTTTCATGTTGATGCTGGTCAAATGACCACATATGACATGAGCTTAACCTT
ACAAACTGTTGCCAATTTGAAAATAGCAATAGAAAGGAAAACAAAGGTACCTGCAAATGC
TTTAGTGCTGCTTGTTAGTGGAGGTGAAGTATTAGAATCGGACCACATGGTTTCCTCATA
CAGTGCTGGTACAGACACAAATCCTATTTATATGTTCAACAAACCATCAGTTAAAGAAAG
CCACTTGCAGCAATCAATGTGCGATTTAAGTCCCATAGTAGAGCTGAGCTCTGGTGAATT
CACTAGTGATACTCGTAATACTTTGGACGGGAAATCAGTTGCTGAACTGAAGAATGAAGT
GGAAGTTTGTTGTTCCATGGCACCGACAGTTCACACAGTGATAACATGTGCCTCACTGGC
ACAACAATTCAGTGATCTCGCATATAAAGTTTATAGGAGCTGTGATCAACTTGTACATGA
GCAGCATTTACAACATCAGGGATGGGCAGCCGTTGTCGCAAATTTAGAAGACATCTACAA
CGAATTTTGTGAACGGTCTAGGAGTTTCAAAGAATCTTTCAAAAAACACAGACTAAAAAA
GGACGAGTACCATGAAAACCTTGAAACGTTAAACGAAGTTTTAGATTATCTAGCTAAAAT
ACCGATATTGCCAGCTTTGCAACTGAACGCGGAAGCACATCGGTTCTCTGCCTTCGATGT
TTTTGAGGAGACGGATTTCGAAGGTCACTCGTATAGAAGCGGTCACGCATTGGATCATAG
TTCAGAGAGTAAAGCCGTTCAGGATTTTGGTGTTGATGCTTTTAAATTGTCCGAGGAAGA
TGTATTCGATCAAGATGTCTCATCAGGCAGTAAAGATGTGCAATCTCAAGTTGGTAAAAA
AATTGAGAGTTCAGACGAAGGGATCATGTTCAGGACGAGGGCGTCTGAAAGCAGGGAGGA
GCCAACGTTATTACATTGGATCCTTGCTCAAGGGAACAAAGCCTCTTTGAGGGATATTCT
TGATTACTGCAAGAAGGGTCTTGCTTTGATCGTTGCAGAACCTCTGAAGGAAAAGGAAGC
CGAACTATGTCACATATTGGAATACGCTAATATGCGAGGTTTGAAACAGATCAAAGGCAT
CGAGGACCGACTGTACGGGCTCGATCAGTTGTTAAGTGAAGTCAAGAAATTGGAAAGAGA
CCAACACAATCAAGCTGCTTCGCTTATACAATATCGTGAACGTTTGAACTCGGCTTGCGA
CCCGTCAGTGTTGCCGACGTTAGTGCAATCGCACTGGTGTCAGCTCAAGAAGTTGCTCAA
GGGACACCAGACTTTAGTGGACATTAGACGCCGCATCTCTAAGTCGAAAGATGAACTGTC
TCATATTTTGAGAGCAAGATTAGAGGCGGTGCTGATGATCGAGAACTCGATGTCGGTGCA
GGACGCGCACGCGATGCTGTCGTACCAGTGCTTCAACCGTCTGGCGCGCTACTTCAGCAT
CGTGGCTCAGTTGCACCGCGCGCCCGCCGTGTTCGTGCGGGCCGTGCACGAGTGCGCCCG
CAGGAGGACCTTCTCTACGCACCATCTTAAATGGGCCACAGAATTAGCGGAAAAATTGCT
TAAAATCCACGACGAGGAAGTGCGTCGCCGTCAGGAGTTCAACGAACTCTTCGAGGGTCA
TTTCTTGAGGAGCCTCTTCCCCGGACTCACGGACCTACCGCCCGCCTTCTCCACGCAGGC
CCCGCCGGTCTTCGATGATCGGTTACCGAAGATCACGGATACTGACGTCGAATTTATTTT
GAATTCGTTCCCGGATTTGGCGAAGGATGTCCCGCAATATGACATGGAAGCAACCGTTAA
ATTCTTTCAACAAAGGTTAAGTGCAATAAACCAAGAAGACAATAATGTAGAAGTACAAGT
CGATTTTGATAAGGACACAGACGGTGACAATGATACTGGCGATTTCGAAAGAGTGTCGCA
GCAGATCGATACTAAGAAGATCGATATTTCGACGACGTGCTCTCCGGACACGGTAGCGGT
GTCGACCGTCACTGAGGAGAACATGGATACACACAAGACGAGCATGGATAGGTTACAAGG
TTTTTTCATTAAATTATACGGGCTGTGCAAAGTTAACGTATTTTATATTCTCGAAGAGTT
GCTAGCCTTGAAAAATGAATTGAATGAACAGACTAAATATATGAACGAGAAGTACGTCGA
GATATTACAAGCGTTGGAGCGTAGTAATGAGGAGTCGGCTTTGAGGTTCCGCGAGCAGAC
GCAGCGCCTGACCGTCGACCACGAGCTGGAACTGAGCGACATGAAAGCCTCCTTACACGA
GAAAGACGATATCATCACACAACTGAACAATGAGATGGAAAATGTCAAACGAGAACATCG
GAAAGAGATAGAGAGATTAAGTAAAGAACACGACGGTACGAAGGAGTTGCTCGAAAAAAC
TAGGGATCAGGTAAAGGAATTCGAAAGAAAACTAGAAGAAATTGACGCTGTTAAACAGAA
AGAAATAAAGGAATTGCAAGAGAAGATGCACATGGATTACAAAGCTGAAATTGAATCTCT
GCGCTCCAGATTCCGCTTGGTCGCTCTCACGAACATGGATCGTTCGCCTTCCGAGTCCAG
TTTGGAGAAGATCGAACGCACTGACGTCATCGAAATAACGAATCACAACGCGATCGTGAT
GCAGACGAAAGAAAACGCCGAAGTCGAGAAAGAGGAGGCGGTCAGACAAGCTGTCGCGAA
ATGCGAGGACGAATGGAAACAGAAACTGGAATCTGAGTTAGGAGCTTTGAAGGCGAAGAG
CGACACGACGTCAATAAACGAAGCGACGCGTCGTTTGTTATGTGAAAAAGATCGTCAATT
GGAGTTGGCGCGCGAGAGGGAACAAGTGCTCGCGCGGGAATGCAGCAAGTACAGAGACAC
GATACAGCAGCTCACCGACCCCGAGACCAATGACTACGACGAGCTCGTCAAAACTCAGTT
TGCCTCGCTTGAAAACGAGAAAGCCATTTTACGTCAAGAGATACAGGATTTAAAGAAGGA
GCTGGAGAAGAAATCTGAAGAGAGCGAGAAGAGTCGAGAAGATGACAGCGAAGGCCGATC
GTCTCCTAGACGCGAGGATTTGAAGAAGTTGAGATCCCGCTGTCACACTCCCGTAGGGCT
CCCTGCGGGCACTCTGAGTTTTTCTGCTTGTTTGCCAGGACACACCGTTCTGGTCATGTG
GGAACCCGCACATTTCAATTACACGGTGATGCAGGAAGCGCCGATAATGTACTTCGTTCA
TAGCGATTGTCTCCCGGCTCTGGATCTCAGCATACAAGTGAAGAACGAAAGCGAAAGAAA
GCTGTATGCCATCGCGACCGTCGAGTCGAAGGAGTATTGTTATGCTAAAAAGAGCGGCAA
CCGTTACCACATGCCGCGTAGCTCACGTTTCTACCGCGTCCGGGTTCGTCCGTCGCGCGT
GCACCAGCCACACCCGCCGTGCTGCGACCACAAACACAAACAAGATGCAATGAAAGGCGG
AGTGTTGCCAGTGTTCGCTGAGCGCCGACCGCTCAAGAAATGGCTGACGTACATGCATGT
CCCAGACACTCAGAAATCTGTCGATACAAGTCAGTCGACGAGTTCGAATACGGACGAAGC
GAATCGAGTCGAAGTAGCAACGGGCACGCTAATAAACTTGGAGTCGCCGGTGTCGACGAG
TGAGGCCATGTCTACGTCCAGCGCCGCCCCGCAACCCGAGGACCAGTTGGACTCTATAGA
GGCCAGCGATCAGTGGCAGAACTCTAGGATGCAGCTATCCACCGTTAGCAATATAACTGA
CATGGAATCCAGTGTAGGAAGATTCCCGGGACAGGAGCCTTTGGAGTTGACCGTGAGTTC
CGTATCGGTTCTGTCTCGCGGCTCTGTTCCTCCTGGCTCGGAATTGGCGGAGGAGGCGAC
TCCATGACCCAAGCGTATCAAAGCCACCGCTTTGAAACTTATATAGTCGATACTTCAACG
TGAAATATCGATACATATTACGTGCAGTGCGGTGTACTTGTGATGCGCGAATTTAATCGA
TTTTGACGTGATCACAACTGGTATCGATATAAATGTGCTGAGTGATGTGGAATGATAAAA
GGTTGAAGGTTAAAAGGAGAGGATTTGAAGAACATACAATATTCTCATTAATTTGGATTT
TTATGTATATAAAGTAGTTGTATTCTTTTAGTGTGGTAAACTCAACGTCTTTTGTGTTCT
GGTGTGATGGATGTTTAAATCGTGAGAAAAAAAAATCGTTTCTACGCATACAATTGGAAT
AAAAATTATCAGTTTTTGGATAAACTAATTTGTGTCTTCCAATATCTTCTGAATATCTTT
TATCGAATGAAAAAATCCGCCTCAACTCTGATGACTGAAGCTGACTGCGATTCAATATTT
ACGAATGGAGTGAATTCTTTTTAAATTGCTCTTGCAGTTTGTTATAATTAAAAAATTATA
ATTATAATCTAAACATTCTTCATTAATACAAAATTTTTGTAATTTCAAAAACGAACCTTC
AGTCTCTTATTATTACAGTCGTAAATAGGAAAGTTGTCGAGGATTATCGATCCTTTACTG
ACCAGTCTTTTTATTCTTCTCTCGTTAGTACAAAATCGCTTAGTCGTTTACAATTTTACT
TATTATATTTGTTCAATACGTATATTTACTGTATTATTGGTTTGTATTTTTATTTTCCTG
TCGCAAACAATATCGATGCAATATAAATGTGGAATATAAATTATTTAGTTATTTAGTTTT
TTTCTTCTTTCAAAAATGTAACTGTAGATGCGATGTAATAGCGTAGTTAGCACAAAGTAG
TTACGGGGTATTTGTAATCGACTTTCTTGCTTCTCTGTACTAAGCGTCGTATTATTCGAT
ATTACAACATTTAATGAATATTATGATTATCACAATAATTTGTAACGGTAACTTCTCTTA
AGGTTCCCACGTAGGTCTGTTTCGATAACTAAGTCATAGTGATTAGTTCCTCGTAGGGAT
TACTCTCTAAAATATCGTTAGACTTTAACAATTATGCTTTAACACACGATCTCGCTCGAT
TCAAGTTTTTTCCCCTAAATATCGAAATCTAGCCTTAGAATACGACCGCGTTTCTCATAT
CGAAGATAAATAAATACGATGCATGAATAATGGCGTTTGATCCGTCTTAGTCTTTAGGAA
ACGATTTGCAAATCAGTGTGCTTAGTTCGATTTTTTTTAACGTTCTCGATAGCG
(5514 bp)

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