SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp13855_c0_seq3
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		PREDICTED:_serine/arginine-rich_splicing_factor_7-like_isoform_X3_[Plutella_xylostella]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006369 P termination of RNA polymerase II transcription
GO:0006397 P mRNA processing
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0031124 P mRNA 3'-end processing
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048025 P negative regulation of mRNA splicing, via spliceosome
GO:0051028 P mRNA transport
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:2.84 TPM:3.07
ORF EntryO_BomoOtmSK11255_complete:A_BomoOtmSK_comp13855_c0_seq3
Sequence
(Nucleotide)
ATTTTTTAATGATTTAAAGATTAGTTTAGATAAGACTGGCTTGGAGAGCAAAGCATGTAT
GTATTGATTAAAAAGTTTAATACCTAAATGTTAAAGGAAAAAAATAACCCACATATTTTA
AAGTAAGGGGTTTGCACGTCACCCCAGTGTTGGTAATGTAAAATACAATAACCACTCAGC
TCCATGTATGTACTCTTTCAAACTTTAACACCAAAATCTGTAGGACATTTCTTTTAAATG
CCAGACATCATTAATATTCTCTTGATAATATATTAATATCATTCTCATTATATTTATAAA
AAAAATATGTAAGTCTGAGCACACATATTTATATAAATACATCAATAACAAAAATTAGAC
TCCCAGAGCCTGACTTCAAAATAAATGCTCTCAAAAATTATCTGCTCAGTTGCTCTCCCA
GTCAGCCTTACATAGCCTTACAGCACCACTAGTCATCAAATTTCCAGTCAGTGTGGAAAA
AAGTACTAGAAAATCTTTCCCAAGCCAGTATATGTAAACAGCCTTAAAAACTTTCTGTAA
TAGTCACACATTTTACTCACCTTATTACCATTTAAGTTATTGCCACCAAAGGCCACCTAT
CCTACTTTAGACAAAAAAATACAATTCATTGATATCCAGGCATATTTTTGAAATCAATGT
TTTTCTTAAATAATTTTGTGGTCATATTCCTCAAAAACATGAAAACATGAATTCTGTTCA
TTTTGTGGCCTCTGAACACTATAATGTTAATATAATGTGTAACTCACTGAGTATACGCAG
TGATTACATTAGACGTGCGTCGCTACTCGCAGTATGAACAAACTCAATGAAGTTGTCGAC
AAGTGAAGTGTGCACGTAGGATGTAGCTACGTAGTTCACAGAGCGAAGTTACAGTTGGGG
CCAACTCATTCGGAGTACACGCAGAGAAGTGAAAGCTACGTAGCGCAGATAATAAGAAGT
GCAGACACTGACGAGTTCGTTCTCGGCGCACAACCCAATGATAACCTGCGTCGCCGACGA
CGTGAACAGTCACGAGCGTAGTGTCCTCTGTCGCCGCAGTCGTAACAACGATCATCATAC
GGCCGAGGAGGCAGACGCGAACGAGGTGGTGGACCCCGGCTGCCATAACCGCGACCCCCA
TTAGACATTTCTACACGGGCTCTACGACCGCAAATCGTCCGTCCATCCAAACCACGTACT
GCGTCTTCAGCATCCCGTGGATCTTCGAATTCAACAAATGCGAAGCCTGGAGGATTTCTT
GCAACCCACACATTCCTCAGTGGACCATAATATGAAAAGGCATCTTCAAGTTCAGGTTTA
CTAGCATTATTCCCCAAATCTCCAACATAAACTTTGCAGTCACCATAGCGTGACATCGTG
GACGATGCTTTTTGGATGGTCAATTAATATTTTAATGCGTTTTATCACCAAACCATTACA
TTAGTTGCCCTCCGTTTTTAAAATCACTCTTTCAAACAAAATGGCGGTAAGACGCGTACC
CTACCGGTACCGGTCAAG
(1518 bp)

- SilkBase 1999-2023 -