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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp13855_c0_seq1
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		PREDICTED:_serine/arginine-rich_splicing_factor_7-like_isoform_X3_[Plutella_xylostella]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006369 P termination of RNA polymerase II transcription
GO:0006397 P mRNA processing
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0031124 P mRNA 3'-end processing
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048025 P negative regulation of mRNA splicing, via spliceosome
GO:0051028 P mRNA transport
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:3.09 TPM:3.33
ORF EntryO_BomoOtmSK11251_complete:A_BomoOtmSK_comp13855_c0_seq1
Sequence
(Nucleotide)
CATCATTTTACTGATATATATCAATTCAATGTGGTTTCAGTCAATTTGTTGGACCTATAA
TTTTAGCTCAATTATAGGTTTATTGGTGTGGTAGCTTCAACATAGCCAACTTAAATTGTC
ATTACTCTTAAATCATAATACATCTAATTAGATTTCTTGGAATCTTTAGACGGCGACCGT
GATCGAGAACGCGACATAGAACGTGCCTTCGAACGGGAACGAGAGCGTGAGCGAGAGCGG
CTGCGGGATCGAGATCCAGACCTTGGAGAGCGGGATCGGCTACGCCTGCGGGACCTCGAA
CGATGAGTATACGCAGTGATTACATTAGACGTGCGTCGCTACTCGCAGTATGAACAAACT
CAATGAAGTTGTCGACAAGTGAAGTGTGCACGTAGGATGTAGCTACGTAGTTCACAGAGC
GAAGTTACAGTTGGGGCCAACTCATTCGGAGTACACGCAGAGAAGTGAAAGCTACGTAGC
GCAGATAATAAGAAGTGCAGACACTGACGAGTTCGTTCTCGGCGCACAACCCAATGATAA
CCTGCGTCGCCGACGACGTGAACAGTCACGAGCGTAGTGTCCTCTGTCGCCGCAGTCGTA
ACAACGATCATCATACGGCCGAGGAGGCAGACGCGAACGAGGTGGTGGACCCCGGCTGCC
ATAACCGCGACCCCCATTAGACATTTCTACACGGGCTCTACGACCGCAAATCGTCCGTCC
ATCCAAACCACGTACTGCGTCTTCAGCATCCCGTGGATCTTCGAATTCAACAAATGCGAA
GCCTGGAGGATTTCTTGCAACCCACACATTCCTCAGTGGACCATAATATGAAAAGGCATC
TTCAAGTTCAGGTTTACTAGCATTATTCCCCAAATCTCCAACATAAACTTTGCAGTCACC
ATAGCGTGACATCGTGGACGATGCTTTTTGGATGGTCAATTAATATTTTAATGCGTTTTA
TCACCAAACCATTACATTAGTTGCCCTCCGTTTTTAAAATCACTCTTTCAAACAAAATGG
CGGTAAGACGCGTACCCTACCGGTACCGGTCAAG
(1054 bp)

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