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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp13846_c0_seq2
Scaffold_idBomo_Chr14
NCBI non-redundant
(nr)		pre-mRNA_cleavage_complex_2_protein_Pcf11_[Bombyx_mori]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0000993 F RNA polymerase II complex binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005849 C mRNA cleavage factor complex
GO:0006369 P termination of RNA polymerase II transcription
GO:0006378 P mRNA polyadenylation
GO:0006379 P mRNA cleavage
GO:0006397 P mRNA processing
GO:0031124 P mRNA 3'-end processing
Transcript
Level		FPKM:8.16 TPM:8.80
ORF EntryO_BomoOtmSK11233_complete:A_BomoOtmSK_comp13846_c0_seq2
Sequence
(Nucleotide)
GTTTTGTTTATTGGCGGTCCGAGCCTCTGTCTGACAGGTACAGGCGTGACCTCTGGCGCA
GCGACGGAGACCAGCGGAGTCGCGGCGGGAGCGACGGGCGCAGTCGCTGCGGCCACCACG
GGAGGGACTGCTGTCACCACCTTTTTAGCATTCTTCTCAGCTACCTCAAGCTGCTTCCGT
GTCTGCTCCAATTCCAACTCAATCTTTTTCTTTTGTAGCATGAGCAGCTCCTGCTCTTTC
TTAGCGATGATGGTTCGTTCTTCGTCAGTCAACACCGGTGTGGAAGCCGGTGGCTTTTTC
AGAAAATTTGGATTTACATGGATGTTTGATTGCTGGGGTTGGGCCTGTATCGGCCATGCT
GGATCAATGAGGTTGACCTTGACATCTAGCTGGTACAGCTTCGTCGCTGGGAACACATCG
TGCCAAGTCTCACGAAGTTTGAACATTTGTGACCGTATTTTCTCATCAACCTGCTTAAAA
GTCCTTGTAAACATGTTGACGATACTCTGTGAGAATTTTTGTGTGTAGGCTCCGCCAACA
TTCTTGATAATTGAATCAACTAAATACAGAACTGGTAACTTGATATCGGGATGCACCTTC
TCCAAATGCTTTTCCACGGTTTCAACGATAACCCCAGCGTGTTCGATATTCTCTTCCGCA
AGAATTGTGAGCATATTTATCAATGGCTTGCTGTTGACGGTCAGATCCGCCAAACTGGAC
GCATATTCCTCGGAGATTTCTTTCGACATGATGCACGGCCGCCCACGATGGCATGCCAAA
CACGAACTTTTAGCATCAACTGCACATCAGTTGTTAAATATAACACGAACTGTTCAACGA
TAAAGCACTGTAATGTTAGCCACGGCACGTTCTTAGATACGCAATATACAAATAGCACAC
CAATCTGACGCGTAATTTTGTTTAACGCGCTGCAGACTTTTTCAGTTATCGAGAGTAAAC
GTTGTGACTCAGATAGTCGAACACGAAATGGT
(992 bp)

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