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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp13808_c0_seq1
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		5'-3'_exoribonuclease_1_[Bombyx_mori]
Ontology
GO:0000723 P telomere maintenance
GO:0000932 C P-body
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0004534 F 5'-3' exoribonuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006396 P RNA processing
GO:0007126 P meiotic cell cycle
GO:0007569 P cell aging
GO:0016020 C membrane
GO:0016075 P rRNA catabolic process
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
GO:0045111 C intermediate filament cytoskeleton
GO:0071028 P nuclear mRNA surveillance
GO:0071044 P histone mRNA catabolic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
Transcript
Level		FPKM:5.37 TPM:5.79
ORF EntryO_BomoOtmSK11152_complete:A_BomoOtmSK_comp13808_c0_seq1
Sequence
(Nucleotide)
ACAGCCCGCGCGACACGCACACCACGCGGTCGTACAGCCGGTAGTCCGCCGCGCGGTCCG
GCGACACCTCGCCCGCGTGCAACTCCGCCTTATAAAGCAGATTCCACTTGACCTGCATCG
TGATTTTCCTCTCGTTGGCATTGAGTATCTCCAGCTGCTTGTCGATGTTATCAGCCAGGG
CCTTCATTTCTTCAGGTTCTAAGGCCTCGGAACCACAATCCCTTCGAAGCGCGCGACGGA
AAGGCTGGTTTTTGATCCACTGTAATACGTCCTGGTATTTCTTCTCTCCAACTTCTCCGG
GCCACAGATCGCTCTCAAAGAAAACGTCTCTTATCGACGACGACGCGAGTTTGTCAAACA
GTTCCGGGAAATTCTGGGCGTAATCTTTGACGAGCTGCACGCAGCGGTCCGAGTACTGCC
ACGCGCCCGTCACCGCGCAGCGCCGCGTGTACCCGGCCACTTCCTGATTCTTTTTATTAA
ACTTTAAATTGAGGCCGATATTAATTTTCTTGAGTTTGTCTGTTGACCGTCCGTCGCGGG
TCCCTTCCACGACGAACACGCAGCCCGTGATGCACGACAGCATCTGATTAGTGACACCGC
ACGCGGCCGCGGCGTGCTGGCTGCTCTTGTAGGGGGGCGCGGGCGCGGCGACGGGCGTAG
GCTCCACGCTCTCGCACACCGACACCTTGATGCGCCCGCTGCGGACCTGCGCCGACTCCA
CCACGGTAGCCAGACACCCGTAGTACTGTCCGGGCGTTAACAGGAAGACCGTGTCCCCGG
GAGGGTAGGCCTCCTGCAGCGTGCTGAACCTGTTGACCTCCTGCACCACGTGCGCGCTCA
CGTCCCTCACCACGGCCTGGTAGGCATACCCGCACGGCACCTCGCACCATTCCGGCTCGT
ACACCATCTGGCAGTTGTCTTGGACGATATACTTGTAACCTTTCAAATTAACAGCGTGCA
CTATAATATTGACATCGCCCAACTCTATGCCGAGTCTGTTCATGTTGTGTTCAATAATAG
TGTTCCTCTCTCCGAGCCATTGTTTGTGTAAGTTACCGCTGTTCTGCACCGTGGTGTACA
GCGGCGTACCGTTCACATTATTGTTCTGCTTGTCGACGTAATGCAGGCGCGTCTTCTCAT
TCGACACTGAGATAACTTTAGCTCTCGTGAGGTGCGGCCACCCAACCCATATAACTTTAC
CGAGCAGCTCGTTCGCCACCCTCTCCAGGGAATCCTCATCTTTATCTCGGATCAGTTCAA
TAATTACGCTACTATTTCGGGCTGGCAGGTCAAAAACTTTCACTTTTGCCATTTTATGAC
TGGACTTATATTTGAGATGTCTCATGGTGGGGAAGCCCGGGAACAGCATGTCCCGACGTG
CGTTGGGCAACATTCCCTTCTTCAGCTGCTCCTCGGGCACGTCCAGTTCATTCCTCCACA
CTCGTTTCTCGAACGCGTGACACTCCTTGATCGATGGGAAGTACTGAGGAGCATCGACGA
CACCTAGACTAGTAGAGCTCCAGCTGTAGATCAGCATTGGTCCCGGCTGGTTCCTTTTAA
TTTCCTCGTCCGTCAGCCGCTGGTAGCACGGCGCCATCGCTGACAGTAAATTAGCCTCAT
CTATGAACGGTATGAGTACGACTGCCTCCCAATCGTTGATTTTCCCGTTGAGGTCGGTAT
CGAAATGCACGGGATAGTAATGTACTATCGGCGAATCTTCATCAGTCATTAAATCGTGAA
ACGGGGTCGGCAGTAGATGCTTACTGGCGGCCGGCAACACTGCTAGCAGCTGTTCGAAGG
GCTTGAACGGTTCCCCGAGCTCGAAGTCGATCTTCAGATCTTTGAATCCCTTAATGTCGG
ATATGTAGGGGGCGTAGTGGTGCGGATAGAACCAGCACCACGAGGGGCAGCCCTTGTAGT
AGTAGTACAGGTTCCACTGGATGGCTCGCACGTAGCCCTCGGCCTGGTCCGCCAGCACTT
CGTCTGTAACTTTCGAATAGTCCAACTTATTCATATAATAATCTTTTTTATGCAAAATAA
ACTCCATTTCCATGTTGGCTTCCTCATCGCTCGTTTCCTCGTATTCTTCTTCACCATCTT
CCAAATCATTCATAAACATATTGTCTGTAGCATTTATGAGTGCTTGCAGATCATTGTCCA
AATGGTTTCCTTTTATTTCATTTACATCTACGTTGAACGTTTCATTGTTATTAGCTTTGT
ACTCTCTCCTTTCATTAGCGTTAGGTCGTCGTCCCGTTTTTTCTTCGAAGTACTTTAAGT
CGGTGTAGGTGTCCTGAAATTTTTCTTTGTCTATCTTAGAAAGTTCTTGCATAAATATCT
CGAATCTTTCCAAGTTCAGATCACCAGCTTCGTTTATATAGCCATCTAACTTAGGCAGCA
CGGTCATGTAAGTATTATACAATAGTGGGAGTGCATCGTTATTGACGTGCATGTTTGGTA
AATTAGGTATAAAATCATTTCCCACTAAGAATCCCATGAGCACCCAGTCATCAACAATCT
TCTCTATATCATAAGGAAACGGCAACTTGTCCTTTATCGCGATAAACTCTTGTTCCAAAT
ATTCTCTCAACAGAGATAAATGTAGTAAATAGAAGTTCGTCTCTTCTGGGGTTGTCGCCC
TTTGGGTTGTTCGGCCAAATTTAACCTCTTCTCTCAAAAGTGCAAAATGTGGTTCATGCG
TGCACATTCCCAGCATTATGAGATCTGCATCAAGACCATACAGGCAATGTCTTGTATTAG
GATCATAATCGGGCTGCGAGCGTGCCCATCTAATATAGTCCATTATTTTATGCTCCCCTT
CGCCAGGGGTCTCATGTCCAGAGAGTATGACCTTAACTTTGGACCAGAGTGGATCTGTGG
ACATTTTATGCTTCACGAAATATTTGAGTTGTTCATGTAGGCGTGCCATGAAGACAGTTC
CTGGGGTGATGCAATTACTGTCGAATCTCTTCTCCGTAGGCAGAACTTCCCCTTTTGCTT
TAGCCTCTGCTTCTAAATTTTCTGCCTCTCTAGCAGACCGGAACCTTCTGCCTCTCTGCT
GGTTCATCTTCGCTCTAGGTGCAACTCCATCAATAGCCATGAAAAATAATTTTTTTGGCT
TGACAATTTGAAATAAAATACTAATATAATGGAAGACATCAGTGAATATCTTCTCTTCAG
TGATACGAAAATGTGGGTTGGAGTCATCAGGATGCGAGCAATTGTGAATGATTCCATTCA
TGTCTAAATACATGTTATCAAAATCTGGAATCTGATACTGTTTTACCAGCTCATTGAGAC
AAGGATACCTTTCACTGGTATAACGGAAAAATTTTGGGACACCCATTTTTGACAATAGTT
AACACTGGAACAGTTAACCCTATTTAGAAATAAACGCTTGCACTAAGTTTATTCACTGTT
CGTCACCCACAGGACTGGATATTGCATCACTCCAAGATTATATTCTAAAGTTACAAATTT
TGTAACTGAGAGTTTAATTTTATAGATTGATTGATCAAATTTTATTTTAATTTTGAGAAT
CACAGGACGGTACACACACACACCACACGTCACACCATCATAG
(3583 bp)

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