SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp13805_c0_seq2
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC106720343_[Papilio_machaon]
Ontology
GO:0003676 F nucleic acid binding
GO:0015074 P DNA integration
GO:0046718 P viral entry into host cell
GO:0046872 F metal ion binding
GO:0075713 P establishment of integrated proviral latency
Transcript
Level		FPKM:0.89 TPM:0.95
ORF EntryO_BomoOtmSK11145_5prime_partial:A_BomoOtmSK_comp13805_c0_seq2
Sequence
(Nucleotide)
CGGAACACTAAGATATTATTAACACATGCAGACGTTGAATTAAGTTCAGTATGTATACCT
ATTGAGTTTATTATATTCCCCGATTCTCAGAATAATGAAACCTTGTTAGGAATAGATTTT
ATTTTGAAGGCACGATTAATAATTATCGATTTCTCTTCTATGACTTGGCACTCGGCTGAT
CAGCCCCGGGACATTCACCCTTTGTCATGTGAAAATTCACGTGACCCCATAAGTTGCGCT
TCTATAAACTTGTTGCGCGAAGATGAAGGCAAATTCTTATCGGAGTCGGAAAAGGTGCGT
CTGGTGGATTTACTAGGTGAATATTCCGATGTTTTCGAGGAAATCGGTGAGCCGACTCCC
TTTTCAGAGCGTCGGATCGACACCGGCGACCACCCTCCTATCGCTGTACCTCCGTATCGT
GTCACGCCGGCGAGGAAAGAGGTCATTAGTGCCGAGCTCGACAAGTTATTCGTCGTGTAT
AGAGTGCCAGCGGTACCAGCCGTCTAACTTTAAGCGAGCGGGACTACTCCAGACTCCAGT
TCCAGCTCAGCGGTTTAAAGTTATTGCAGTGGATCTTTTCGGGCCTTTACCCAAAGGACC
CTGCGGTGAGTGGCGGATACTCGAAGACACCGCCAGTAAGTGGGTTGAGCTGTTCGCTCT
CATTGATGCCACTGCCGAGGTATGTGCAAAAACCCTCGTTAATGAAGTCTTTATGAGATT
CGGAGTGCCACGCCGGATGATTTCCGACAACGGAGTTCAATTTGTGGCCGATGTCATGCA
AAAGGCTATGTTTGTTTTAGGGGTAAAACAAAATCTCATTCCTCTTTATCATCCCGAAGC
CAATCCGGTTGAGCGGAAGAATCGGGACTTAAAGGCTCACCTTGCCATATTGCTTGAAGG
CCGTCACCAGCAGTGGCCTGAGGTACTGTCGTTCGTCCGATTCGCTTTTAAGTTCCGTCT
GCACGTCAACCGAGCAAACGCCAGCTTATCTTACCTTTGGTCGTGAGCTCCGATCTCCAA
TATCCGCTCAGCTTGATCTTCGCGCCGTCGTTGAGTCCGAGAACTTTGTCCCCCAGATAA
GCCCATACTTGTCCAAGCTTGCCGAGACCATCTCGACCGCTAAGGAGAATATTGAACATC
ATCAAGATATTCAAAAGACGCGCGCTGATCTAAGGCGCTCTGAACCTTACCAGTTTGCAG
AAGGGGATCTCGTATTGATGAAGACCCACGTACTTAGTAATGCTAGTAAGGGTATTACGT
CGAAGTTTAATCCTAAGCGGGATGGGCCATATGTGATTTCAAAAAAGGTGAGTCCTACTT
CCTACCTTCTAGCATACGAGTCGTCGGGCGAAGTTTTTGGTAAGTATCATGTCTCGGATT
TGCGACCTTATCATGCGAGGGAGGATGTATGTCCCGAGCCTGTGATTCCCAAGCGCCGCC
GGGGTCGACCGCGTAGGGTGGTGGAGTAGACTGGGTTTCATTCCGCGTTGTTTGTTTGAC
CAGTCAAGGATTTCTCGCCAGGTCAAAAGGGGGAGTGTGTAACGTGCGGAACCGAAGTAA
AATAATTAATCCTCGC
(1576 bp)

- SilkBase 1999-2023 -