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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp13793_c0_seq1
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		protein_ROP_isoform_X1_[Bombyx_mori]
Ontology
GO:0000149 F SNARE binding
GO:0000281 P mitotic cytokinesis
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006887 P exocytosis
GO:0006904 P vesicle docking involved in exocytosis
GO:0007268 P chemical synaptic transmission
GO:0007269 P neurotransmitter secretion
GO:0007317 P regulation of pole plasm oskar mRNA localization
GO:0009416 P response to light stimulus
GO:0012506 C vesicle membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016082 P synaptic vesicle priming
GO:0016192 P vesicle-mediated transport
GO:0019898 C extrinsic component of membrane
GO:0019905 F syntaxin binding
GO:0030707 P ovarian follicle cell development
GO:0032940 P secretion by cell
GO:0043195 C terminal bouton
GO:0048489 P synaptic vesicle transport
Transcript
Level		FPKM:9.07 TPM:9.78
ORF EntryO_BomoOtmSK11118_complete:A_BomoOtmSK_comp13793_c0_seq1
Sequence
(Nucleotide)
CGCACGATCTGTGGATAACATTATTGTAATAAAATGTGTTAGCTAATAATAAAACTGATC
ACTGTTAATTTAACGAGCCGAACAGATTCCAAATACATATCTACATAGGTACAGCTATTA
ACAAAGTTTTATCCAACTAATAATCCAACATTTTTGGTTTATTTTTATTACAGCATTATC
ATAGTTTCTTTTTTAAATCTACTTAGATTAAGTTTTTTTGTAAAACATGGGATAGGTGCA
AAATTTTTGTTAAATTGATTTTTGCAATGAATACAGCCGACTTTACAGATTTCATTGTTC
CACGAGCGGCTACTGTAAACTACATAGATCCCTATATATTTAACGTTTTCTACATTGCTT
AAAAATATGGAAACATCTCAAATCAGCAAAAGAGAAAAATGTGTTTTATTTATTTGACAC
CAATGCCAGACTCCATAGGAATGTTTAAAGTTTTTTGTTAAACTTTATTTACACAAATTC
TATGGAAATAAAGTTCATTAACCTCTAGCAAATCACAAACTATCTACACGTTATCATTAA
TAAAAGTTATGACTTACAAGTTGAAACTAAAGACATAAAAAGGGCACATCTTGTGATATG
TATATCACTTTTTACATGTTTCAACCAATGTCGACCTTGGATAATTTATTCTGCATCCAC
TAAACTTAGTTTAAGTTTTTGTTAAATCACTAAACGCTGCACTCGACTTTGCTGACACAG
TTGCTAGTGTTCATTTAGAACTAGTTCATCAGTCTGATGTAATCCACTTTTCCATAGATT
CTCACAATTTAGTTTTATATAAAACCAAATAACAGATATATAAAATCATTTAAGTAACAA
CAGATAGATACAAAGTAACGTAGTAAAGTAGTAATAACTAAAATTTTATAAAGGAACTTA
AATATGTTAAACTTAATTTGTAAAACTCGTTTAATCTTAGGTGGTGTCCGATTATGCAGA
TTATTTAAATAAAGTAAAATCTTTTTTCACAGAATTTCACCAAAATTTTGGAACCTATTT
TACAGTTGTACAAATTAAGATTAAGGATGATATTGAAATAATATTCAATATGAATCTCAT
CCAAAAAAAAAACATTCGATTAATAACAAAACAGCCAAAACCGTTCTAAATTCTAATTTT
GAAAAGATCTCGATTTATCTCTATTTATGATTCGTTGACATCTTACGTGGATAGAATCAT
ATATGAATACAGTCAAAAGCAAACTGATTTTACACTTAATTTCTACAAAGAAATAAAAGA
TTTAAAACTACAATTTTTATATTTAAATAATTAATACTTTTATGAAGTTCCAATATGTAG
ATGTTTTAAATATTAAAGTGAGTAAGCCACACGTATAACTGTATGCAAACTACATAGTAT
ATTTTATTTTATTTACGCTACAAAACCAGCTAAAGCGTTGTTAATACAAAACTGTTTGGT
TCATAAACTTGTATAGGTAGGTAACGAATACGGTTTAGTAAGGCGGTATTCTAACTTGCT
AAAGAGTCTCATAAATTTTCTTTCACAAAATCATTTCCTCATCGGGGAAGTAATATTTTT
TTAGAAATCATCGTCGCATAGGTGATGATCATCCGGCCTTTCTCATTAGGTTCTTGATCA
ATGTAGGTAAGTAAGCTTCATTAAAGCATAGTTCAGAACACGATATTCGCTCTAAAAGGA
CATTGATTGTACCTGAATTTGATCAGTAAAATGTGTAGTTCTTCGTGTACAATCCATGTT
CTGATATTGTGTGGTTACAGGACTAAGTCATACATGGTAAGTTTTACTTACTAGGCCATA
TTATTTTTATCATATTGTGTATAACGATCCCGGGATGCCCGATAATTCACAGGTTGTTAT
AATTAAATGTTTCTCTTCATTATCTTGTTGATCAGACTCATTAGCTTACCTCGCACATAA
CAGTCGTGATATTCACCTAGATTTTTAACAAGCTAATAGAGAAAGGGTCTATAGTGAACT
TGTAAAATTAAAACGATTTTAGGCGGAGAGAGAGCTCAGGTCCGAAAGGAAATTATCCGG
AGTGAGTATGTGTGATGATCCGATGATCACCTCCCAGTTCTTGATGGCTGCAGTCACTTC
GTAAGCGCAGCGGATCTCGGAGAAGCAAACACCTCCAACAACGAACACAATCAATCTTGG
TACGTTCTTGATAGTCTGCTGGGCTTTATCCTTGTGCCAATGTCCGTAACGAACGCTTGT
TGGTGCTTGATACCCTGAGGTCTGTGCTCTTCCAGCCAGGAAGGGGAAATGTCTTTGATC
CAACTTGTCCTCGATAGCATCTTCCATGATGTCCTTGATGACAGGTGTCCATCGTGACAT
TTGATAAGTTTGCTCAGTGATTCTTTCCTTTCTGGGAACTTGATACTGCTTCTTACGGTT
TCCATCAACTACCACATTGAGGCCCACGTTGGCGAGGTTCAGGATGGTTTGCTTGTCAGA
GGGCTCAAGCTGTGCATGTTTAACTAGTTTGTTGAGATTCTCTTCAGAGATGCCATTTTT
TGCCATCACATACAAAGCAATAATGCGCATCTTGTTGAAGTTTACTACTGTCTGATCCAG
AAGAACGGGAACAATGCTTCGCATATGATCTTTGATTTTCTCACCATCGGCATCAGTGCC
CATGGCAAGATCCTGTTCAACTTTGCAGAGTTTGTCTACATATCCTTGGTAGCTTTTCAT
GCAATCTTCAGCAAGGCGCAAATGTGTTGCATATTTAGACAGCTCTTTTTGATATTGAGG
CATTTTCTTTATCATTTGCGACAGGTCCCTCATAGATTGTTTGTCACCGCCACCCATGCG
TTTGGACTCGGTGAATTTCTTCAGATTCTTTGTAACTGCTGTAGAGACCACAGCAATATG
CTGGTGCCGCAATTCGACCCATAAGTCATCATTTTCATCCAAGAGAACTTCCTTTAACTG
CCCCTGGGATGCATCATACTTGTAAACATCATTTTCAATAGGCAGAAGATCATAAGCCAT
GGCCTGAAGAGTTAGTTCGTGTAGTAACGGAGACACGCAGTCGAACCCGCGGTCCAGAAC
GAGAAGCTGAGAGCGGGCTTTTTCTGGTCCTTCGCCCATAGTTGGTTCGTCAGCCTTATA
AGCATCAAGTTTCTGTTGGATTAGTTGAGCTAACTCAACATTGCGTTCCCAATCACTGCG
GTATCGAACGGAAGGATATTCGCCGAGCGTGGCACAGAGGGTCGCGATTTGTTCAGCAAT
ACGTTCCATGTTTGCGTTACGAGTCTGTGCTAGAGCTGGGTTGTACATGCATTGGAATGT
TTCAGGTGAATCCAATGAAAATACCTGCTGTTCATATGGAATGAAAGCAATGTTGATTTC
CTTTAATGTTTTAATATATTTGGCTATTTGGCTACGGGATAACTCATTAAACAGAATATC
AGGACAAGCTTCAGTGAAGAAAACATGAGCAGCTCTGTACATGATGCGGTTACCGACAGC
AAAGTCATTGATCAGAGCATGCACTGATTTCTCAGACGGAGTAATGAGGTAAATACCATC
CATGGTGCATAAAGGTTCACGTTTCTTGTGAATGTCCTCAACCAAGGTAATTCCTTCAGC
AGATATATCATGCATTTTGCAGCAGGCTGAGACCATGCGCATGGACAGTTGGTCTACTAT
TAAAACTCTCCATTCTATTCTAGCTGATTCCTTGCCTTTGGGTCCGCGATAGCGGATCAC
TTCATTCATAATCTTTTGTCCGACAAGTGCTTTCAGAGCCATTTTGAACCGTAGACTCGG
G
(3781 bp)

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