SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp13792_c0_seq1
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		probable_28S_rRNA_(cytosine-C(5))-methyltransferase_[Bombyx_mori]
Ontology
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0008150 P biological_process
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0044822 F RNA binding
Transcript
Level		FPKM:7.10 TPM:7.65
ORF EntryO_BomoOtmSK11115_5prime_partial:A_BomoOtmSK_comp13792_c0_seq1
Sequence
(Nucleotide)
TTGGCACATGTCTCGTGATTTAATGCCGATTTATTGAAGTAGTTTGGTTATGTCCATTAA
TCAACTATGAATTTCGCTTTCTACGATTGCGAAATCTAAAATGTTCGAGCACTCAGTCAA
AGTACCGAGACACTATAAAGTAGCAGCGAATATCTTAAAAAAAGTTTCCACTGAAGGCGG
CAGTGTTAAGACTTTGTTATACGACGATAAACTCCGTCACTTCAGGACCAATGTGCTTTT
TGCACTGATAACAGAGACCATTAAACATTCTGATGTCATTAACAAAATATTTGAAAGCTG
TGACATACTGCAAAATGAAATCCGACTAGATCCGTGGCTAGCGAAAATACTCACAGCAGA
GCTGCTATATGGTAAAAAAGTTTTACCGGGAAAAAGTAAACCAGAGCAAACAATCTCATC
TTACAAAGAAAATTTTGAAAAATATCTATCTGAACATCAAGATGATTCGCAGATTCAAGA
TGTTCCAAAACCTCGTTACGTGCGCATAAACACGAACTTGTTGACAACATCGGATGCAAT
CAGAGCCTTCCAAGATGAAGGGTACCACTTCGTTCGCTGTACCTCAGGATCCTATGAAGA
CTACCTCAAGCAGATTCAAAATCTTTCCGAGGAAGACTTCACCCAGGATTATCATGTCAA
AACAATATTTGTATTTCCGCCGGGAACTAAACTACATGACCATGAACTTTATTTTGAGAG
CAAAATTATTTTACAGAATAAGGCAACGGCCATGGCGGTTCACTTGCTGGCTCCTCCTTC
TGGTAGCATAGTTTTGGACATGTGCGCCGCACCCGGCATGAAGACAACCCAAACAGCAGC
GTATATGAGAAACAACGGTAAAATATACGCAATCGAGAGAAACGAGAAACGATTTGAAAC
GTTGCGTGATTTCGTTAACAAAACCGGGTCTCATTGTGTCGAACCAATCCACCGAGACTG
TCTGGAGATTAAGAAAGGAGAATTCGATGACGTGGAATATATACTACTGGACCCTAGCTG
CTCGGGATCTGGTATGGATATAAGCGTTCACAACTATATAGAAGAGAGCAGATTGGCGAA
GCTCACGTCTTTACAAGAGAAATTTTTGAAACACGCCATGAACGCTTTTCCCCGAGCCAA
AAGGATAGTGTACAGCACATGTTCGTTGTTCCCCGAGGAAAATGAAAGGGTCATAACCAA
TGTTGTCAAGACATCGAGGACTAAATGGAGAGTGCAAGATGTTAAGGAATTACTGAAAGG
CCAGTGGAAGAACTTCGGGTCAGCTATGTACGGAAGCATGGGGACCAGGTGTATGTACGC
CCGGCAGGATTCAGATTTGACTACAGGCTTTTTTTTAGCGGTTTTGGACAGAGACCCTAA
AGATCTAGAGAAAAGTTTGAAAAATCAAGAACAGAATGGTGAAGTAGTTGAGGAGGAAGT
CTGTGAGAAAGATAAAGAATCAAAAGCCGATTATGAACAAGATAGGGACGTGAATGAATT
AGATACGCAAGTAGATTCAGTACAGAAACGAAAAAGGAAGAAAGAGAGATCAGACGAAAC
TCACTCAACAATTATTGATTCGGAAGGAAATAATTTAATAGTTGATACTATGTCTGAAGA
CAATGCCTTAAGGGTGAGTGAATCAGAAACATCAAAGAAGAAAAAGAAGAAGAAAAAATC
AAAAGATACTGAATATTATTCTATCGAAATTACTACTGAAAATAACATTGACATTAATGA
AAAACATAACAAAATGCTAAATAAGAATAAAGTATACGACACAGTTAAATGTGAAAATAC
TGAAAAAGACAAACTGATTGTGGATGCCGACTTAGAAGAACCCGTCAAAAAGAAGAAAAA
GAAAAAAGATAAGCGTGACGAAACAGAAGAATATAATGTTGAAAACGGTAATGCAAAAAG
GCAATCAAAAAAGAGAAGTAATAACAATGATTTTAATGAAATTGCAGAGAAGACAGAAAA
TATTGAATCAGACAAAGTACCAAAAAAG
(2008 bp)

- SilkBase 1999-2023 -