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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp13705_c0_seq2
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		cyclic_AMP-dependent_transcription_factor_ATF-6_beta_isoform_X2_[Bombyx_mori]
Ontology
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006986 P response to unfolded protein
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0031625 F ubiquitin protein ligase binding
GO:0035497 F cAMP response element binding
GO:0042802 F identical protein binding
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:1990440 P positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress
Transcript
Level		FPKM:7.91 TPM:8.53
ORF EntryO_BomoOtmSK10963_5prime_partial:A_BomoOtmSK_comp13705_c0_seq2
Sequence
(Nucleotide)
TTTGCAAGTCATCAACGGGAGAAATATTAAAGAATAATTAACAACACAATAGAACAATTT
CAATAACAAATTTTGTGAATTTCCTACTAAATAAATGAAATTTATTGCAAAACTATAATA
TATACTACAACTAATATATGTTCATCTTTTAATGTTATTATTTAACAATATTATTTTTGA
ATGCATGTGCAATACGTCAACCTTAACCATTAAATTAATAGCGAATATATATCTCGTCCT
ACATTGACTTTTAAAAATATGGTACACCAATTTTTATTGCATTACGAAAACAGGCTTATT
AAACCTCTATGTTTTTTTAATAACTCAACTATATTACATAAACTTTTCATGGACTAACAG
TGACGTTGTTCGATTCTGTATACTGGACCTTTTGGACCTTATTAGCTGGTTTAGGGTCTT
CCTTAGACATTAAGTAATTCGACATCATGTCATAATCTAGGTTAGTAGAAATTTTATTTC
TCTTAATTATGTTATTAGGCAGATTATTGCTGGCATTTTGTAGAACTTTAGAGAGACTAG
CATCAATTGTTTCTTTATTCACTTTTTTAATATCGAACTTGTCACTGCGTACTTTATCAT
TTGTTTGAGTTTTCCTTAAACTTTCCGGAAGCGCGTCCGACCTGAGCTTCACCAGTGTTG
TATTCAATACAGAACAATCTATTTGCATCAACATCACGTGGTCGTTCAATATGGAATCAT
TTCCATTTCGTGCAGGAAGTATGAGTGCCATTTTAGGAGGACGAGTGACATTATGCGAGA
CGGCAGGCAGCAGCAGGTGTTCGCCCTTCCCAACTCCGACCACATAAAAGGTGTCGTCGC
GCCTGTCCAGGGCCTGCAGCAGAGTGTTCCATTCTCCGAAGTCCTCCATGTTAATATCGT
TCATAGATTTTCTCATTGGTTTTGTGTACAGGTCGTAGTCGATCACAGCACTCTCGGCGA
AATCAATGTCTCTATTGTTCCGCCTCAGTCGTCGCAGTCGCGACTTA
(1007 bp)

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