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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp13701_c0_seq4
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		DNA_ligase_1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003909 F DNA ligase activity
GO:0003910 F DNA ligase (ATP) activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
GO:0051103 P DNA ligation involved in DNA repair
GO:0051301 P cell division
GO:0071897 P DNA biosynthetic process
Transcript
Level		FPKM:1.34 TPM:1.44
ORF EntryO_BomoOtmSK10958_complete:A_BomoOtmSK_comp13701_c0_seq4
Sequence
(Nucleotide)
TTTTTTTAGAAAAAAAACATTTAATTACATCAAAACAATACTTATAAAATATATACAAAT
TATTCTTCTTAATATAACGGAATGATTTAACATATTTATGTACTTAAATGAGAGAGAAGC
CGACACGGTCCCTTGGGATCAATCTTAATTCTGAACCGTGCTTCAGGAATACATTACCGG
CTGTCTGCTGAGGATTTATGCCGATACCGTCATCAGTGATAATAGCACTGGTGGCAGGGT
CCACCCTGAATTCTTCAGCTGCAAACTTCAACACTGCAGTGAATGGAGTCGCTTCCGGCA
CGCTAAGTCTAGTTTAGAAGAATAGAGAAAACCAGTCTTGTACTTTTCTTGATATTTTGA
TGAGCAATTAATAGAATTATACATATCTTAGTTTTAGTAAAGAAATTCTCACATGATAAA
GATTTTAACTCTGTATCGTATTAGCAGAAAAACTTAAGACTCCTTTTAATAAAAAATCAG
CACAGGTGTAAAAAATATATATACACATCATTGAACTGACATGTTAATCATGTGCTGAAG
CTTTTAATTCAGGAACAACATAGTACACGCAATGGTAATGCGTAACTAACTTCTTATTAT
GTTCGTTGTGGTTTAGAGATATTGAATTTAGATAATCTAAACTACTAACAATCAACTTCA
TGCAGGCATATAAAAATGATGAGATGTGGATTGATATAATATAATGAAATAATAAAAAAT
TAACACCCAATACTATCCCAATATCCTACATCTAAATTATTTTCATTCATAATAGACAAA
AATTGTTTCTTCAAAATATCATTATTCATAATTCTCTTGATTATATCACTTAATTCTGAA
TGTGGTAAATCTAAATAAAAATATTCCAGAGACATATTGTTTTTTAACAATTTGGCAATA
TCTATTAATGTTTCAACCATGCACTTAAACAAATCAGTATATGAGATGCATAACTGAATA
AAATACTTTTCATCAACATTAAAAAGGCTTTTCCAGAAACTTTTGCAACTTTGGTTTTTC
AGAAGCATAACATTTATAAATGCTTCATTGATCCAAACAATTTCTTTATCGTGTTTGTGG
TTATTACTTAATAAACTTACAACTAAAACTTCCATTAGACTATTGTTGCAGTTTGTTAAT
AATTGTTCTAAAAACATTTTCGAATCTTTGGTTGTGGAAAGATTGTACAAAAAAATTTGA
CTTTTTAATTCTAGTAAAAAACAATTTGGTATGTGAGCCGGCAAATTGTCTAGCAATGTG
CGTTTTGATGCTGTTTCTAGCATAATGTCAGATAGACACTCCACTAATTTGTCTTCATCG
AATATCTCTATGTAAATGTTAAGAGATATGTCTATTTGATTGATAGAGCAATCGGAAACT
ATAATTTTTTTTAATACAGCTTTTGTAGAGTCTGCAAAGCAATTTTTTAAAAAGTAACAT
GATTTATCATCATAATTATACAATGTTGAGAGAAATTCATTTAACAGGTTTCTTTTTTGA
AGTTTTTCCAAACATTTCTCTATATGTTGCGCTATTTTAAATGCATTTCTTAGTTCTATG
TCAGTTGTTGTGTTGTTGGGCCAATTTTCTGCCTGACAGAGATTAACGAAATCTTGAAAA
AAGTCGAAAAACTCTCTCAGTACAGTCTCTTCCATTTCGCAGCGATGTAACTTCAACAAT
AACCCATGAATTCAGCATACTTTAAACGGCAGTTTCGGATCAGATGTGAGTGTAATCTTG
AAAGTTACTTTCGACATTTTAAACTATACACAAATTAAAAAATTTATGTTCAATTTCGTT
TCCCAATTTATTACAAATTACAAAACTGAAGTGACGTACACAGTAGTACAAATATATTAA
GTATATAATCTATGGGTTAACATGTAAAATCAGGTTTTTTTGAAAACCAGAACATAATAT
TATAGTGATTGGAATCAATTTTTTCTGGAACCAGTAAACAATAACTAGCTGTATGGTGTC
GTCAAGTGACCGGGTTCATACTGTGATTACCGTGATTTGTAAATGAATTTGACTAAATCT
TTATTCGTAAATAGATTAGTAAAAATTAGCTATTGTTTGTTATATAAACAGATTACAAGT
AACCGTACAATCTGCTATAACAATAAAATTTACCAGGAAACCAGTCACAACATGGCTCAA
AGGAGTATCACGTCATTCTTCAAGAAAACTCCATTTACACCTATGGAAATAAAAAGTAAT
GGTGGATCCAAAGTAAGCCATGTAAATGGGGACACATCACCCATATCCGACGAAAAAGAC
AAGCCTTCTGAAAGACAACAATCCAACAGCATAGATAATGACGGTGACTCCCAAGATTCT
TTGAAACCGAAAAATAAAGCTAAACGACAACGTGTGATAAGCTCTAGTAGTGAATCAGAA
TCTCCAGTTAAAGTGAAAAAGGAAGACCTTTCAGACAATGATGACTCTATAACTTTAAAC
AAGAGCGTAAACAAAACTTATGACTCACCAAAAAATAAAAAAGCTAAAATAAAAAAAGAA
ATCAAAAGCCCATCACCTAAAAAGGGTGCAAAGAGTTTGTCTCGTGATGAGGTAAAAGAA
AACAGCTTAAAATTGAAGATTGTTGGATCAAAGGAAAAAGACAATATTGTGAAAAATACC
GAGCATATTGATAATATTGAAAATGAGAGTGAAGAAATACAGAAAGTAGCAGAAAATGCA
TACAATCCATCAAAATCAAAATACCACCCTATAAAAGATGCTTGCTGGTCTAAAGGCGAC
CCAGTGCCGTATCTTGCATTAGCTAAGACTTTGGATCTTATAGAAGGAACATCAGCTCGA
CTGAAGATAATAGAAATATTAAGTAATTTTTATAGGTCTGTAATGGTGTTGACTTCAGAA
GACTTGTTGCCTTGTATTTACTTGTGCTTAAATCAACTAGCACCAGCATACCACAGTTTG
GAGCTTGGCATAGCAGAAACGTACCTAATGAAAGCCATAGGCCAGTGTACAGGCCGTACC
CTAGCACAAGTGAAGTCTGCAGTACAGAAGTGTGGGGATATGGGAAGAGTGGCAGAACAG
GCTCGAGCCGCACAAAAGACAATGTTTGCGGCCCCTAAACTTCAGATAAGAAAGGTTTTT
GCTGCACTAAAAGAAATTGCTCACATGACTGGTCAAGCATCAGTGAATAAGAAAATAAAT
AAAATCCAGTCCTTGTATGTCGCCTGCAGAGATTGTGAAGCACGATTCCTAATAAGGTAA
CATTCTACACTCTGGATCCTCTACTTTGTCCAACTTGTCTGGCTGGGTCCAGTTAATGTC
TGTGGAAATGTACTGAACTGATTTGTCTCCGCGCCG
(3336 bp)

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