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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp13701_c0_seq2
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		DNA_ligase_1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003909 F DNA ligase activity
GO:0003910 F DNA ligase (ATP) activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
GO:0051103 P DNA ligation involved in DNA repair
GO:0051301 P cell division
GO:0071897 P DNA biosynthetic process
Transcript
Level		FPKM:4.19 TPM:4.52
ORF EntryO_BomoOtmSK10954_complete:A_BomoOtmSK_comp13701_c0_seq2
Sequence
(Nucleotide)
TTTTTTTAGAAAAAAAACATTTAATTACATCAAAACAATACTTATAAAATATATACAAAT
TATTCTTCTTAATATAACGGAATGATTTAACATATTTATGTACTTAAATGAGAGAGAAGC
CGACACGGTCCCTTGGGATCAATCTTAATTCTGAACCGTGCTTCAGGAATACATTACCGG
CTGTCTGCTGAGGATTTATGCCGATACCGTCATCAGTGATAATAGCACTGGTGGCAGGGT
CCACCCTGAATTCTTCAGCTGCAAACTTCAACACTGCAGTGAATGGAGTCGCTTCCGGCA
CGCTAAGTACTTTAAACGGCAGTTTCGGATCAGATGTGAGTGTAATCTTGAAAGTTACTT
TCGACATTTTAAACTATACACAAATTAAAAAATTTATGTTCAATTTCGTTTCCCAATTTA
TTACAAATTACAAAACTGAAGTGACGTACACAGTAGTACAAATATATTAAGTATATAATC
TATGGGTTAACATGTAAAATCAGGTTTTTTTGAAAACCAGAACATAATATTATAGTGATT
GGAATCAATTTTTTCTGGAACCAGTAAACAATAACTAGCTGTATGGTGTCGTCAAGTGAC
CGGGTTCATACTGTGATTACCGTGATTTGTAAATGAATTTGACTAAATCTTTATTCGTAA
ATAGATTAGTAAAAATTAGCTATTGTTTGTTATATAAACAGATTACAAGTAACCGTACAA
TCTGCTATAACAATAAAATTTACCAGGAAACCAGTCACAACATGGCTCAAAGGAGTATCA
CGTCATTCTTCAAGAAAACTCCATTTACACCTATGGAAATAAAAAGTAATGGTGGATCCA
AAGTAAGCCATGTAAATGGGGACACATCACCCATATCCGACGAAAAAGACAAGCCTTCTG
AAAGACAACAATCCAACAGCATAGATAATGACGGTGACTCCCAAGATTCTTTGAAACCGA
AAAATAAAGCTAAACGACAACGTGTGATAAGCTCTAGTAGTGAATCAGAATCTCCAGTTA
AAGTGAAAAAGGAAGACCTTTCAGACAATGATGACTCTATAACTTTAAACAAGAGCGTAA
ACAAAACTTATGACTCACCAAAAAATAAAAAAGCTAAAATAAAAAAAGAAATCAAAAGCC
CATCACCTAAAAAGGGTGCAAAGAGTTTGTCTCGTGATGAGGTAAAAGAAAACAGCTTAA
AATTGAAGATTGTTGGATCAAAGGAAAAAGACAATATTGTGAAAAATACCGAGCATATTG
ATAATATTGAAAATGAGAGTGAAGAAATACAGAAAGTAGCAGAAAATGCATACAATCCAT
CAAAATCAAAATACCACCCTATAAAAGATGCTTGCTGGTCTAAAGGCGACCCAGTGCCGT
ATCTTGCATTAGCTAAGACTTTGGATCTTATAGAAGGAACATCAGCTCGACTGAAGATAA
TAGAAATATTAAGTAATTTTTATAGGTCTGTAATGGTGTTGACTTCAGAAGACTTGTTGC
CTTGTATTTACTTGTGCTTAAATCAACTAGCACCAGCATACCACAGTTTGGAGCTTGGCA
TAGCAGAAACGTACCTAATGAAAGCCATAGGCCAGTGTACAGGCCGTACCCTAGCACAAG
TGAAGTCTGCAGTACAGAAGTGTGGGGATATGGGAAGAGTGGCAGAACAGGCTCGAGCCG
CACAAAAGACAATGTTTGCGGCCCCTAAACTTCAGATAAGAAAGGTTTTTGCTGCACTAA
AAGAAATTGCTCACATGACTGGTCAAGCATCAGTGAATAAGAAAATAAATAAAATCCAGT
CCTTGTATGTCGCCTGCAGAGATTGTGAAGCACGATTCCTAATAAGGTAACATTCTACAC
TCTGGATCCTCTACTTTGTCCAACTTGTCTGGCTGGGTCCAGTTAATGTCTGTGGAAATG
TACTGAACTGATTTGTCTCCGCGCCG
(1946 bp)

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