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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp13697_c0_seq2
Scaffold_idBomo_Chr14
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_E3_ubiquitin-protein_ligase_UBR1_[Bombyx_mori]
Ontology
GO:0000151 C ubiquitin ligase complex
GO:0005737 C cytoplasm
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0008023 C transcription elongation factor complex
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030163 P protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0071596 P ubiquitin-dependent protein catabolic process via the N-end rule pathway
Transcript
Level		FPKM:2.73 TPM:2.94
ORF EntryO_BomoOtmSK10944_5prime_partial:A_BomoOtmSK_comp13697_c0_seq2
Sequence
(Nucleotide)
ATGCGGTAGGCGGAGGCGGTGAGGGGCCGCTCGGCCGCGCACCACTCCAGCGACATGGTG
ATGGACTGCGCCAGCTTCACGTGCAAGTTGAACGCGGACTCCCACTCCGGCTCGTATTCC
ATGTGCTGACCCACCTGTCTAACAACCGAGTCCATCCCTTGCATCATGACGAACAGGTTG
AGCAGCAACGAGAGCCCGTGCAGGAATCCCTTCCGCAGGTCGTCGTCGAAGCTCGCCGGC
ACGGAGCCCAGCAGGTACTTGACATCGAACAACACGAACTGGGCGCGCTTGTACGCCACC
GACACGTGGTTGCGATCGAACTCTAGACGACCATTATTGCAGCGTCGGTTACACTCGCTC
ACAAAAGTGTTGAGCACGACGAAGAGCGCGTCGTGCTTCGCTATGAGCAGGTGCGCCAGC
GTCGGCGTCGTGTACAGCTGCACCGACAGCGACGATATCGAGAACGAGTGGTCGTGGTCG
TCTCGTATGAAGTCCTTCAGTATTGAGCCATAATTCTTGGTGAATAATATAGCCATGGTT
CTCTTGGTGGAATAGTCCATGAGCGTGGTGGCGATGAGCAGCCGATGCCAGGCGGTCCTG
GCGGCCTTCCACATGCGGAAGTCGTTCTGCATGACGCCGACGGCCACCCCGCCGCCCCCC
ACCGCCGTGCTCGAGCCCCACATGTCCTCGCCCAGCGCCACGTGGGACACAGCCATGCGC
AGACTCTGCTCTTGGCTTACGAAGTTCTGAAGCCAGGTGAGCAGCTTCATGGCGAAGGTC
TGGTGCGCGATGACGTGCGCGTGCATGACCAGCACCTTCAGCGTGGAGCTCTGGCGCGCC
GTGAACATCTCGATGTCAGTTTTGAGTTTGTCGCAGACCTGGAACGAGTTGCACTTGATG
AGCGCCCGGCCCTCGCGGTCGATGAGGCTCACCAGCTCCACGGAGTCGCGGTGGTTGCAC
TTCGTCACGCGTATCAACGTTGTTATCACCTGCTCGAAGGTGTGAGTTTCGTCGTTGTAG
AGCACCGTGCAGTAACAATCCGGCTGGTCCAGTATCTGCAGGATGTCGCGCTCCGTGTCT
TTCAATCTGAGATCGTTTGGCAAGCATGGAGCGTGATCGTGTGTAAGCAGCCTTAGACAA
TAAGTCAAACAAGCTGATGCTACGATCTTCATTCTTCTTATAACATCCTCGCTTATGCCT
GCCTCGGGCGGTTGATCGCTTGGAGCAGCATGCAAATCACAGAATGGATCCCGTTTCCAG
GCCTCGGCGTCACCGCAGTCACAGCAGCCGCCGCCACCGGACTGCCCCATCTTGTACTTG
TGGTGTCTATGAGCTGATACCTTGAAGCACTCCACGCAGAGTACGCAAGTGTTGTCCATG
CCACATTCTCTGCAACTATATGCAGGTTCGCCTTGTTTGAACACCCGCCCGCAGAGTGTA
GAGCGACGAGGGGGACCCGGTTGAGATCCCTCTGTTGTACCCCATATGAACTGTTCTAGG
GGTTGGATGAGCAATTTGGCAGCTAGTTCCTCGTCGAAAGACCAGTCCAAACATGTTCTG
TTGGGTTGTGGCGAATATATTCTCGGAACGGTGACGCGCCAATGATCTTGAAAGTGCGAG
GGCGCCAGTACACCCTCCTGCAGATTCTTCCGCCATAGTTCCACTACAGCATCAGCGCGA
GCCGGCAACGTGTACACCACTTTTGGTCCCAAGACACGGTCTTGCTTCCTGTTTATTCGT
TCTGATATATTCATTTATATTTGCTTCTCTGTACGATCAAATAATGCACAATATACCTAA
CGAGAATGAGGTTCGTAATGAGACCATCTAAACACTGATAGAGAATCGTTGGCTAAAAAC
AAGAATTTGTATTCGCGAATACGGTAGCCAAAAACTCTTAATGAACGCTGGACAACTGTT
TGAAACGCAGGTAAAC
(1936 bp)

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