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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp13681_c0_seq1
Scaffold_idBomo_Chr6
NCBI non-redundant
(nr)		double-strand-break_repair_protein_rad21_homolog_[Bombyx_mori]
Ontology
GO:0000228 C nuclear chromosome
GO:0000775 C chromosome, centromeric region
GO:0000785 C chromatin
GO:0000794 C condensed nuclear chromosome
GO:0001228 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006310 P DNA recombination
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007059 P chromosome segregation
GO:0007062 P sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0007131 P reciprocal meiotic recombination
GO:0008278 C cohesin complex
GO:0016020 C membrane
GO:0016925 P protein sumoylation
GO:0034991 C nuclear meiotic cohesin complex
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051301 P cell division
GO:0071168 P protein localization to chromatin
Transcript
Level		FPKM:1.72 TPM:1.85
ORF EntryO_BomoOtmSK10877_5prime_partial:A_BomoOtmSK_comp13681_c0_seq1
Sequence
(Nucleotide)
TGCGGCATCATCGGCACCTCGCCCGACACCTGCAGCAGCGCGCCCGACGACACGCCTGCT
GGGATCATGCCGCCATGTTGTAGCCCTGCCGGCGTCATACCACCGTGCTGCAGGCCTACT
GGGGTCATACCGCCGTGCTGCAGCCCCGCAGGCGTCATGGCTCCGTGCTGAAGTCCAGCC
GGCGTCATGCCTCCGTGTTGGAGTCCGACTGGCGTCATGCTGCCGTGTTGCAGGCCGGCC
GGGGTCATTCCACCGTGCTGTAACCCTACTGGTGTCATGCCACCGTGTTCCAACCCTCCG
GGCGTCATACCACCATGGTGTAAGCCAGCGGGTGTAAGACCTCCATGCACTAAGCCCGCT
GGAGTCATTCCACTATCCAAACCCAATCCTGGCGTCATTCCTCCATGATGCAAGCCTGCT
GGGGTCATTCCACTAGGAGGCAAGCCCAATTCTACGGAATGGTTTTCGCCGTGTTGTAAC
CCCGCCGGCGTCATTCCGCCATGTTGCAGACCACCTGGCGTCAGCGACCCATGCGCTAAT
GAAGGTGGTGTGAGTGCCGCCTGTAATAATGTGCCCGGAGTAAGTGGGCCCAGCCCTCCC
GGAGTCAACGGACCCAAGGACGACATTATGCCACCTGGAGTCTGCGGAGGGTCTACATCG
AGATCTGGACGCGGTGTTTGCGCGAACGCTCCCTCGCTCGTCTCGACTGAAGGTTCATAT
TCGTGCGGCATTGGAGTGGGTGCCTCCAGTTCGACGGGCTGAGGCGCTGGTGTATCCGGG
GGCGGTAAATGATCTTCATGTTTACGTTTACGTCCGCCTCGTCTCACAACGCTGGGTTCC
GGGTCTGGTGACTTGGCCTCTTCTTCTGCCTCACTGCGCAAGGTCATGTTGCGCTGGTAT
TTCTTGAACAGAACTCTTGATGGGATCGGTCTAGCTGGTAATGTGAATAGCTTTTCAACA
CCCCCAGTTTCCTTCCAGTGCATAAGACGCCTAGTAGGGGGAGCAAGATCTAACGTTGTT
ACAATATCGGAAGTGTTGCTCAGTTGGTTTTTCATTTCTTCGCCCGATATGTTTTTTATT
TCATCCACGATAAGCTTACGTTTACGTTTTGTTTTTGTTATTCCTTTTAGTACTGTGGCA
TCAACAGGTGCAAGTGCAAATGATTCTTCATCGTTGTTCAACAGCGTGGTGTTATCCGGA
GGCTCAACAGGACCGGGGGTCGGCGGTGCGGGCTCCGGAATCTCGTCAACTTCCATTGGT
CTGACGGAGGGCGGTCGAGGTACGGGCGGGGGCGCCATTTCCGGTACTGCTTCTTCTTCA
GGTACCGGTTCCTCGCGAACCGGGGATCCGCCCCAACTGTGGTGCGGCGAGGGCGCGTCG
TAGTGGTCGGGCATGTCGTCATCAGAGTCGGGCGCGTCCGCCGGCCCCGCGCCCGCCGCC
TCTATCTCCGCCTGTAAAGACTGTGGTTGTGCAGAAGCTCCAGGCATGCCTGAAGCCGTG
CCTGAACCACTTGCGCTAGCTGTAACATCTCCGAACAAATCTCCTTCGAACAGCCCTCCT
GCATGTCCAAAGTCCGGCACATCTCCAATAGTACCACCGAAACCATCATCTACAGGAGCA
TGTGGGGCTGGCTCCAAAGTGCGAGCGTGCACTGAACCTGGACCTGAACTAGACTCCTTG
CCTCCCAATTCTAATGATGACCCATCAGCAAAAAGTAGGTTGCTCTGCTCCAGTCCACCT
TCAGAACCAATAGCTTCTCTCATAATGTCAGGATTATCAGTGTCAAAACCCATGTCTCCA
AAGCCATCATCATGGGTGACAAGGTTTAATGATCCATAATCCTCACGCATCGTGATCTCT
TCTGCTCTTGACTGGTTTAAAGAGAATTGGGCTTCAATATCAACCTCATTTAATTCAGGC
ATGGCTGTGTCAAAGTCATGAAAGACCTCTGGTAAGGTGATAGCATTCATAGCAGCCTCC
CTGTGCTCTTCGGGAAGATCTACCATGCCAGGTCTGAAGGCCAACTTAATCTTGACAAAA
GCTTCGTTACAGTCTTGCAACAGATACTTGGCTTTTCTCGAGTAGATTCTCACAACTCCA
AGCAAAAGGTGTCCAGAAGTACGCAATGCCATCTTCACTTTAGGCTTTAAAATACCATCA
ACTGATTTCTCGATATTAGTTTCAAATACGTGTGCTTTTGTCAATTTCTTATCCCAGTGG
GCCGCCAGCCAAATCTTGGCCAGCGGACCCTTCTTAGCCAGCACAAAATGTGCATAAAAC
ATGATGATAGTGGCACTTCCTGATCAAGAATCACATCAACACTTTTCAATTATTTAGTCA
CACATTAAATATTTCACTTTTTACAATCAACGTAAACATGACAACAATTACGTTTTCAAG
(2400 bp)

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