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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp13628_c0_seq2
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		protein_kinase_C-binding_protein_1-like_isoform_X2_[Helicoverpa_armigera]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001106 F transcription corepressor activity
GO:0003682 F chromatin binding
GO:0003712 F transcription coregulator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0042393 F histone binding
GO:0043197 C dendritic spine
GO:0043198 C dendritic shaft
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
GO:0051491 P positive regulation of filopodium assembly
GO:0060999 P positive regulation of dendritic spine development
GO:0070491 F DNA-binding transcription factor binding
GO:0098815 P modulation of excitatory postsynaptic potential
GO:1902897 P regulation of postsynaptic density protein 95 clustering
GO:1902952 P positive regulation of dendritic spine maintenance
Transcript
Level		FPKM:3.12 TPM:3.37
ORF EntryO_BomoOtmSK10742_complete:A_BomoOtmSK_comp13628_c0_seq2
Sequence
(Nucleotide)
ATTTAATGTTATAGTTATATTTAATTATAGTTGCATCATAAATTGCAAATATCACTTAAT
TTTAATGTGAATGCTTCACAAACAGAAATTTATAACCAAACATGTATATATATGGCTTAA
AATCGTTGAAGTAGAAACTATAATAAAAACAATTTACTCAAATATGTAGTACCACTCAAC
AAAGCTTAATTTAATGCAACTTATCAGAAAGTATTGAAATATCTACAATAATGTCAATAC
GTGTATCTGGTGACCAGATGACGTTACATAAAACAAGACTATTTATTCATTAAGAGAAGT
AACGACATCCTAAAACTATAACCATATAATGTAGTGCTAGTACAGTATGTATTGTTTTTT
GAACAGCTTTACTGTGGCTCAGTGCGGGCTATTTCTGTTGAACTACGTCCAACATTTTCA
CATTTTCGACCCCACTGGGTTACAATTCCGCTAAAATGTCCATTAAAATTTTAACCTTAC
TTCTGTTGGACAGTCCGCGGGATTATTTCTAAGTTCGGTTGGCGCTAAGTGAAGTACTGC
AGCGTGTGAGTACGTCGCGGCGGGTTGACGCTGGCGTTGGACGTGGAGCCCACGATGAGG
TAGCCTCCCGACGTTACTACTTTTTTGTTCTCCTCGTTCATTATCTGCTTGTTGATTATG
AGAGGTGGTATCTGCGCGGGCACGGCGCCGGCTTTGCTTCCATTGTACGTCCCCACACAT
TTCACCGTTTGGTTCCCGCTGACGTCCTCGACCATGCTCATGATGATGGAAGACATTGGC
GTACTATCCTGGCTGGCTGATCTGGAGGCAAGTTTCCCGCCGACCGTGAGGGTCGGCACC
ACGGTGCTCTTCTGCAACGCTGGCAACTTATCTGTCTGCGATCTACTCTCAGGAGCGCTA
GTTCCGTCGCTGTTATTATTATTGTTGCCTTCCGATCGTTGCTGCGTGCACACGGAGTAG
TGTTGCGACCAGTGCGCGCGCTGGCACGGGTAGTCGCAGTACGAAGTGTTCCAGCAACAA
TAAAACTGAGCTTCTTGGCTGCAGTTCGCACACCACTGTTTGGATTTAGCTAGTTTGACA
GCTGTCTCCAATTCGATTTGCGCCAGACGCCTGGTCTCCATGACGAGCCGCTGTTTCTCT
TTCTCGAACGTTGCCCGCATTTCCGCCACCGATAATTCAAAGTTATGTTTGATTTCGTCC
AGTCTCTGTTGGTGCCTCCACTTGGTCTGTTCGAGCTGCAGCTTCAGGGACGTGACCTGC
GTCGATGGATCGTCGAGATTATCCAGCGAATCCTCTAGTAGCGTGCGGAAGAAATCAGCT
AGCTTGATGGCGTTCTGATTGAGTTTAGCCGTTAGAGGACCGACGGTAGATGGCGCTGGC
ACAATACCAATTGGGAAGTTGGGATCTAGTGGATTTTGTATCGGCGGCCGCTGCTGTAAC
CTCGGGAGTTCTGTGGGAGTGTTTGTGACGACAGAGTCTCCGGGCCGGCTCGGCGGTGCA
GCGGCAAGGGGCGCGGGGCAGGCGGGGGTCGC
(1532 bp)

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