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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp13579_c0_seq2
Scaffold_idBomo_Chr27
NCBI non-redundant
(nr)		ankyrin-3_[Bombyx_mori]
Ontology
GO:0000281 P mitotic cytokinesis
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005923 C bicellular tight junction
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0007009 P plasma membrane organization
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007165 P signal transduction
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0007528 P neuromuscular junction development
GO:0008092 F cytoskeletal protein binding
GO:0008093 F cytoskeletal anchor activity
GO:0009925 C basal plasma membrane
GO:0009986 C cell surface
GO:0010628 P positive regulation of gene expression
GO:0010650 P positive regulation of cell communication by electrical coupling
GO:0010765 P positive regulation of sodium ion transport
GO:0010960 P magnesium ion homeostasis
GO:0014704 C intercalated disc
GO:0014731 C spectrin-associated cytoskeleton
GO:0016020 C membrane
GO:0016323 C basolateral plasma membrane
GO:0016328 C lateral plasma membrane
GO:0016529 C sarcoplasmic reticulum
GO:0019228 P neuronal action potential
GO:0030018 C Z disc
GO:0030054 C cell junction
GO:0030315 C T-tubule
GO:0030424 C axon
GO:0030425 C dendrite
GO:0030507 F spectrin binding
GO:0030674 F protein-macromolecule adaptor activity
GO:0031594 C neuromuscular junction
GO:0033268 C node of Ranvier
GO:0033270 C paranode region of axon
GO:0034112 P positive regulation of homotypic cell-cell adhesion
GO:0042383 C sarcolemma
GO:0042995 C cell projection
GO:0043001 P Golgi to plasma membrane protein transport
GO:0043005 C neuron projection
GO:0043034 C costamere
GO:0043194 C axon initial segment
GO:0043266 P regulation of potassium ion transport
GO:0044325 F transmembrane transporter binding
GO:0045184 P establishment of protein localization
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0045296 F cadherin binding
GO:0045838 P positive regulation of membrane potential
GO:0050808 P synapse organization
GO:0071286 P cellular response to magnesium ion
GO:0071709 P membrane assembly
GO:0072659 P protein localization to plasma membrane
GO:0072660 P maintenance of protein location in plasma membrane
GO:0072661 P protein localization to plasma membrane
GO:0090314 P positive regulation of protein targeting to membrane
GO:1900827 P positive regulation of membrane depolarization during cardiac muscle cell action potential
GO:1902260 P negative regulation of delayed rectifier potassium channel activity
GO:2000651 P positive regulation of sodium ion transmembrane transporter activity
GO:2001259 P positive regulation of cation channel activity
Transcript
Level		FPKM:9.42 TPM:10.15
ORF EntryO_BomoOtmSK10596_5prime_partial:A_BomoOtmSK_comp13579_c0_seq2
Sequence
(Nucleotide)
CGACTGACTGCGTGGTGCGAGCGTCCACAGGCCCCAATCCGCCAAACGCCAGTACAACCA
CGCTCGCACGCGAATGCAGTTAGCGTTGCTAGTCGAAAACTAGTTAGCGAACGCGCAGCT
GTAACGCGCGCCCTCGCCGCCGGATTTCGCTGAAAAGCGCTCGCTTTTTACCCGTTTATA
TTTTGCTATTAATTTATTTATTTATTTTTAAAAATGGGCGTCGTGAAACACAAGAAAACG
AAAACGGACAATGCGAAACACAAAGAAATACCAAACGGGAAACCGAAAAACGATAAAGGA
AAAGTGAAAAAGAAAAAACTAGTGTCGTGTTTACAGTGCATCAAATCAAACGAAGATGGT
GGCCTTGAGGGTAAATACCGCGTGGCAGCACCTGAGCTCATGCAGGACACGTTCATGAGC
GACTCGGAAGACGAAGGAGGCGAAGTCGAGTGTCCTATTCAACAGCAACAGCAGTACCGC
TACATGAACAGCGAAGTCGGCACGCTGCACCGGGCGAAACCGCTCGAGGACACGGTCACC
GATGGACACCTGTGGCCGAGCAATAATGACAAAAAAGTCGCCACGATGGAACGACAACCA
GTCGATATTGGGTTTTTGGTGTCCTTTGTTGTTGACGCCCGCGGTGGGGCCATGAAAGCG
AAGCGCCGCGGCGGAGTCCGGATCATCGTACCGCCGGCGGCTTGTGCGGCACCAACCAGA
GTCACGTGCAGAGCCGCCACCAGACGCGCCCCGGCCGCCGCCCCGCCCCCGCTGATGGAG
GGCGAAGCTCTGGCCTCCAGATTGTTGGAGTTACAACCAGCTGGAGCCAAGTTCTTAGCG
CCGGTTATAATCGAAGTGCCTATCTTCACGTCCGCGTGCCGCGACCGCGAGATCGTCATC
CTGCGTTCGGACACGGGAGAGACGTGGCAAGACCACTACCTGCACAACAATGACAATCCT
ATGATACAGGAGGCACTGGAACGCGAACGCCAGGAGTACGGCAACAACGGCGAGGCGCTC
GGCGAGCGCGGGGAGCGCGTCACCCGCATCGTCACGTGCGACTTCCCGCACTACCTGGCG
TGCGTGTCGCGCGTCCGCCAGGAGGTGCACGTGGTGGGGCCCGAGGGCGGCACCGTCTCC
AGCTCGCACATACCGCAGGTGCAGGCGCTGTTCCCGCCCGCGGCGCTGACGAAGCGCATC
CGCGTGGGCGTGCAGGCGCAGGGCGCGGAGAT
(1232 bp)

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