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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp13560_c0_seq1
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		hybrid_signal_transduction_histidine_kinase_I_[Bombyx_mori]
Ontology
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005938 C cell cortex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008284 P positive regulation of cell population proliferation
GO:0010468 P regulation of gene expression
GO:0010628 P positive regulation of gene expression
GO:0010629 P negative regulation of gene expression
GO:0010800 P positive regulation of peptidyl-threonine phosphorylation
GO:0010821 P regulation of mitochondrion organization
GO:0010971 P positive regulation of G2/M transition of mitotic cell cycle
GO:0033138 P positive regulation of peptidyl-serine phosphorylation
GO:0045787 P positive regulation of cell cycle
GO:0048839 P inner ear development
GO:0050679 P positive regulation of epithelial cell proliferation
GO:0051301 P cell division
GO:0051881 P regulation of mitochondrial membrane potential
GO:0051897 P positive regulation of protein kinase B signaling
GO:0061418 P regulation of transcription from RNA polymerase II promoter in response to hypoxia
GO:0071500 P cellular response to nitrosative stress
GO:1901858 P regulation of mitochondrial DNA metabolic process
GO:1902882 P regulation of response to oxidative stress
GO:1904031 P positive regulation of cyclin-dependent protein kinase activity
GO:1904120 P positive regulation of otic vesicle morphogenesis
Transcript
Level		FPKM:20.34 TPM:21.93
ORF EntryO_BomoOtmSK10532_complete:A_BomoOtmSK_comp13560_c0_seq1
Sequence
(Nucleotide)
GGAGGCTTTAATGACACACTCGGCTAGTGCGAGATCTCGGGACAGTCCGCACCGTGCTGC
CGACGGTGATGCATGTGCCGCATGGCGCCGCGACGCCGAACTTCCGAGATCGCGAAAAAA
GTTAACTCCCGAAACATTCTTATTAGACTCTCCTTTCAACCCGTATTCTGTTGAATTGGA
ACAGTCTCGATTAGTCGCGTTCGATTGCGATCAGTGAACTACTCGAACCGGAATTTTGCA
TCCTCGGAAACGGGTTTAGACTCGGACCCCGTTGAGTAGGGCTTTCGTGAAGTGCTAACT
TGATTTTCAAAGTGGTGTGCCTGTGCGATCGACTGGATTTTTCACATTCCCGATATTCGG
AAGAAGTCCGAACATTGTCTCTCCGCATATTATATATAGTCCGCATTCTTGTAAAAGTGC
TGTTAAAATTTACAAGCATGCCGCCGCCGGCGTGAGGCATGAGCGGCCGCGGAGGTGGCG
GGCAGCGCTGTCAGCTCATCCTGCAGCGTTGCCTCGCTATACAACTCACCAAGCCCGGCA
ACGCGCCCGACGACTTTTGGATGTACGATTCCGGATATCTGTTATTCCAGAGTTTCTTAG
CAGCGAACGCAAAATGCTGGTGGGCTGGCGCCTTGGCCGCGGCCACAGCGGAGCTTCGGT
ACGCCGGGTACGTGTCTCCAGGAGTTCTTCTCGTGGCAGGGGCTCCTCGGGCGCTGGAGA
CGGTGCGAGGGGCTTACTCGAGGTCCGTTCTGAAACCTCCGCCTACTTACCTCATATGTG
GACTTGGTGACATAGAAGACTGCATCGTGACGCCGGCATACCAGGGGCAGTTCACGCCGT
TACCCGAAGCACTGTGCGATTGTATAATGGATCTTACGTCCCAGGGTCAAGCGGCCACGC
TGGAGAGTATTAGGACATCTCTATTGTCGAAGTTCCCATCAATGCAGACACCATCGCAGG
AGGTGGTTTACGATACCCTAGCCCAGCTGATGCAGGAGAGGAAAATATACCAAACCTCGA
GAGGCTTCTTCATAGTGACACCAGAACGTCGTCGGTCCAGGTCCCGTTCATCATCAAGAC
ACCCCAACAGCCTAGACGAAGAATGTCCATCTCCCCGCACCATTCTCATGTCAGACCAGG
AGGCTCTGCATCAGCTTTACGGAGAGATCACCACGGTTAGGGATGGAGCCGTGACACATC
AGTGTGTGCAAACGAACTTGGCTGATGTAATTTGTGGAGGCAATCCAAACGACAAAGTTT
TATATGGTCGACCGAACAAACGTCGCAGCGCTTCCTTCCCGGCCCCAAGATCTCTGGACC
GGCGGCACTCTCTCCGCATCTTCGGCTCTTCCAGCAAGTACCTTCAGCGCTGCGCCTCTA
CCAGGAGTCTCCATCACAAACACGTTAATACGACTGACAGCTCTTCTTCCACCGATTATC
CGCCTAGTGTTGAGTCCGCGTCGCCTAAAAAAGTGTCCCTGCTGTCCCGCTTATTCAGAC
GAAGCGGCCGCAGCAAGCAGACGCGCGCGATGAGTACCTTCTCCGCCCAATTCCCGCCCA
CCGAGTGGTTCAACTCTAAGGCGGTTCATCTCCACTGTGTCGCAACGCAGACCAACTCTA
AGGAGTCGCTGCAAAGTCAAACATCCTTTGTCTCATCATACTACGACGGTTCAGAGATAA
GTAATCGGTCTTCGACGCTGCCTCGTCGTCACAAGAGGCACCTCTCCACTGAATCTGGTA
TCGCCGGTTCTAATTACGATCACTCGCCGATCAGGCAGTCCAGCCCTAGTTCCGGCAGCC
TTCCGAGATCAACCCTCAGCCGAAGTTCCACTAACAAAACAATTTTAGATCATTTCGGAT
CACCTCAAAGGAGCAGTGATCCGAAACTGCGAGACAGTCCTAGTGGGAGTCTAAGGAGAG
CCGATTATTCGAACTCGGATAATGTTATGTCAACTAGTGGCCCTTCCAGCCTGGAGAGTG
CGACTCCACTGCGAACCCCAAGGAAGGATATAATAAGAAACGGCCAGTCGGACCCAAATG
TACTAATGAAGAGAAGCTACCACACGAGTGGCAGTAGCGGTCACTCCAGTCTAGAGTCGC
ACATATCCGACCGCACGTTGAAGCCTTCGCCTAGTCACTCTAATCCCGGAGCACCAGGGC
TCAGCAGAGCACAATCACTCGTCAAAGTTCAAAGTCTACAAAGCTCTCCAAAGTCGCTTC
ACAAATTCAGATCTAAACCACCAATTGTCGGCGGGGAAACGGTAAAGAGCAGTAAAAGTA
CATCACCTAAGAGCTTACCAAAAAACTGTCCGGATACCCCAAAAAAAACCGCTGCTACGC
TACACAAAGCCATAGGATCTAAGATTGAAAATCCCTCTACTACTATGCTGGCGAGTTCCA
ATTCTAACAATTCAATCACATTAAAAGTTACCACAAACACTATGTCCCAGAACGGTGGGG
GTACGAACACAAAGGTTTATGTGCAGAATTCACCGGTAAGGTCTGTGATCACATTCGAAA
ACGGCAAAGTAACCGAGACGAGTAACGGAAGTAACATTTACATCATTAATGACGACAGAC
ACGTCGTTTCCGTTTCGCAGAACGGTGTGACAACCCAAAACGCCAAAAATCCAAAAGAAA
CCTCATTCGACGTCTGTGTCGAAAACAAAAAGCAAATGTTTCAAGAACAGGAACCGATTA
AAGTACAAGAAAATAAATTTAATAAAAACTCCATAAACGACACGGGTATGAATAATAATC
GTAAGCTTTCCCTGCAAATAGGCGGTGCGACAAATAACAATAGTTTCGTTTATAAGAATC
AATTGAACAATACTAACGAGGTTGGTTCGAATCCAACGTCACCAGCGATCCACAACAACA
TAAACAATTTGGAGACGACGGCAAATAGTAATCCATCCACGCCAACTAAAAGTTACGACA
ACATCATAGGATCTTTAGGAAGTTTGCGATATCAAAAAAACTCCTTTTCACCAACCAACG
GTGGCATCCAAAGTAACATAAATTCGAACAGCGAACTGAAAAGCGTTGATCTGTTAAAAA
AAGCAGCTGCACTACAGATGCTAAACGGTTTGCCAAACGTGAATAACAGAATGAGTTCAG
ATTCTATAGCGAATTTATTAACGAAAGGAATCGACCAAAAGCCGACAGTTTTAGGATCGG
AGCCAAACTTGGCAGTGAAGAATCAAGAGCTTATAAAAGACATCAATACGTCCACAGACA
AAATCAACTGCTTAGATAGCAAACAGAAGAGGTACAGCCTGAGTCAAGAGAGCAAGAAGG
AGAATCAGGATTTTTACAATTTTCCGAGTTTGAGCGATTTGAGCTTTAATTTTACTAGTT
TAGCCGCTCAGAAGATATTAAAAGGTGTCAGTATAAATAGCGTCGACACTTTGGTCGAGC
TAAACATGGCGGCGAACAACTCGGAAAAGCAGAACAACCGTGACGTTGCAGCAGTCTGCA
CAGACTTTGGCCTTGTATAGCACTTAAATAACTTTTCTGTCAAAAATGTATAATAGTAGT
CATAACAAATATATAAGGTAGCTGTATAACTTATTAGTATCACTTTATTTAGTAACATGC
TTTATGTAAGCATTACAGTTAGTTGTAAACTTACTCTTCTAATATTTTATACTCCCCAAT
TATGAATTTATCTTTATTAGATACCATTGTATCCCTATAATTATTAAAATTACGTTTGTC
TTTACTAACTTATCATCGAAAATATCTATGTAGAATTTATTTAACGAAGTATTTGTTGTA
ATCAATTAAACATTCTTAGTTTGTAGCTCACTTTGAGCGCAATTTATGTGAGACAATAAA
GCGATACTGTCTTAATACTAGGTGGCCTAAATTTGACTCAACATGAAATATTGTGCCTAA
TGCAGTAGAAATATTTGTACGCCTAGCTATATAATGTATTTGCAGGTAGTAATTTCAAAA
CTAATAATATATTAGCAACGAGAATAGACAGTACCTATTCATCCTGAGTAAATTCTTAAT
ACAATCTTCAAAGTAGAATAAAAATAGTAATATCTTCACAAAAATGTATTATTTTTTGTG
CCATCTCAGTATTTTCATTGAAAGTCGAGTACAAACTAGAATATCTACACCACAAGTCCA
TCCAACAATGGGAATTTATAGTAATTTGTAAAATATACATCATGTATAAGTGCCATAAAC
CATAGTTTTACGCGTTACACGGAAATGGCTAGCAGAAGGAATTGGATATGAAAATTTTGT
CATTGTATCTACTGTACGCGTGTGAGGGTATTTATTCATTAGTGAACATAATCGAAGTCA
ATGCATATTAAATGTTCAGTAATGCCATTTGTAAAAAAATATTAACAATATAAGATGACG
CTTTATTGAATTGGTTTTATTTTCCCCATTTAGTTGATAATATGAATTTAAATTAGTTAC
ATTCTTAGACAGCAACAACAAACACAAGATGTACCCTATAGGTATTAATTTATCAAACGG
AATGACAACCTATGACTGTTTGATATGAATATCATTTAAACAATAGAAGGATGTGAACAC
TTCAATAACATAG
(4573 bp)

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