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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp13491_c0_seq2
Scaffold_idBomo_Chr23
NCBI non-redundant
(nr)		ubiquitin_carboxyl-terminal_hydrolase_17_[Bombyx_mori]
Ontology
GO:0004843 F thiol-dependent deubiquitinase
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048511 P rhythmic process
Transcript
Level		FPKM:14.71 TPM:15.86
ORF EntryO_BomoOtmSK10342_complete:A_BomoOtmSK_comp13491_c0_seq2
Sequence
(Nucleotide)
CGTCAAGCCAATGGAGTCATAGTTGTCTTCTAAAATTACATAGCAGAAGAAAAAATATTT
TCCCTCACGTATACAGTCCATTTTCAAAGAAATTTCGACGAAAGTGTTATGAGTTGTGTA
CGGCGCGAGTGAAAAAAATATAAAACAGAACACCAAACGTTTCAGACATTGCGTTTTCCG
TGTGTAACATAGTTACTTAGTAACGGAGTTATTTTATTAATTCTGAATCAACCAAAGAAG
AAGATGCAAAAAACACGTAAACCATCCAGAATCAAAGCCAATACTAGTTATTAAAAACAA
TATTTAGTACTAAGCGTACTATGTATTTTGTGTATTAAATAGAAAGTATTTAATAGTCTT
CAAAATGTCTTTAGTTTCTTCGTCAAGGCTCGAGGGATCCTCGTCCAGCCTGTCGGGGTC
CTACCGGTCTACCTTGACCTCTTCGTCAAGCCTAGACAATCCTTATTGCAGGCCACGTAG
TGGCTCATATGCAACTTCAACTATCCGATCTTACGGAGACACCGTCACCGAATACAGATC
CAGATATTCCATCGACAGTAAAGGAGATAAGAAGTCTCTGATAGAATACTCTAGAACTTC
CAGAGCTCCAAGCGTGACGGATTCGGACAGCGGTATCTCGTCCAGGCATCGCTCTGACAG
AAGCGAGTCCAGGTCTAGAGATATTTCGACGACAAGGAGCGAGAGCGGCAAAACTCTAAG
CGACCCCCCGTCTAGAACGAAAAGAAATTTCAGCTCGTCTGCTTTCATGAGCACGGCCGA
GCTTTACAAGTTGTATTCGCCGTCGAACTACATACCGTTGACGCAGAGAATACAGCAGCA
ACAAAAGCTTCAGAATCAGAATTACGGGGAGATATCGAGATCAAAGTCGATCTCGAACGA
CATCGGTAGACCACCAGCAGCCGACCCATCACGCGCTCTAAGGAAAGCCAGGAACTCGGC
TATCGGAACCACATCTGAAAGAACCGAAAGCCGACGTTACAAGGATAGTTCTCCGACGTC
GGGCTACACGAAACGAAACTCCCTTACGAACGGAGTGAGGGACAGTAATGGCAATGAGCT
ACCATCTGTGCCCGAGATGCGAAAGAAGTTTGATCCGAAAATGGCCGTCACCAAACTACC
CGCAAACGAGAGTAGGTACGCGAGTAGGAGCAACGATGAGCGGTACCTGAATCAACTCAA
AGACTGCGAGAACGGTACCGTTGGGTACACGAAGCTACGTCCCAAAGACGACAAACCGGT
ACCCGTTCATCTGCCTTACGTCAGCCGGAACGGTACGTGCAAATGGGAATCAGGCTCGTC
TAGTTCGCGGTCGAATTCCAATTCCGATCTGTCGATTAACAAAACGGCGTCAGAAAGCAG
TATTTCGAAGTATCTTCACGATAAACCTAACGGCGCGAGTACGGTCTTAACGTCGAAAAT
CCCGCCCGACCATTTGACGAGCGTCAAAAGTCAACTAGACCCCAACAATCCAATAGGGAA
GATTCTAGAGAAATCGACCGTGATTCAAGTTCAAAATGGGGACGTAGATTATGCGGAACG
CAAGAGAATACGCAATAGTCCCGAAACGGTTAACAAATCGAAAGACAACATTAAAAACGA
CATTGAAAAACAGGTCAAAAGTCAAAGGCACACGTCCGACTTCGCTTCGTACATACAAAT
CTCGCAGCCGATCGCCTCGGGCACGTCCGCGCTAAAGAAAATTGAAAATCACGTTAACGA
GGAACCCGTCCCCACAGAGACGCGTAAATCTAGAGCCGGCCTCAAATACATAGATTCAGA
GCAAGAGAATGTATCGCTGAACAATGAAATCGAATCTCCAAGTGAGACGGGCTTCGAAAA
TAAGACCTTCGAACACGAGAATTATCTTAAGAAGCGCTCAGAGAAGAGCGAAGGAGACTC
GAAAGAGGAGGATGGAGCCAAGTCCATGGAGACCAGCGTTGAGAGTACTCTGAGCGAATT
GACCGAAGATTCTAGTCCTGAAACTCCGTCTACAAGAAGGAAGCTCTTGGATAAAGAATA
CGATGATGTAAAAGGGGAATTGGCCGGAGGCAAAAGCGGTCCTAGCGGCCTGCGCCGGAG
CACCGATCGATCGGAATCACTCTCCGAATCCAGGAACGAGCGGCAGTCAAGTCACACCAG
TGGTCTGAACGGCCTCAGGAACATCGGCAACACGTGTTTCATGAATAGCGTCCTCCAGTG
CCTGTCGAACACCAAGCCGCTGCTGGAATACGTCTCCGAAGACAAGTATTGCGATGACAT
CAACACGTCGCTGTCCTGCATGAAGGGGGCCCTCATCAAAGCCTTTGCGACGGTCATCAA
GGAGGTGTGGCGCAGTGGTGAGCGTGACGGGGTCGTGAACACCACCGCCCTGAAGTCCCA
GGTTCAGAAGTTCGCGCCGCGCTTCATGGGCTATAGCCAGCAGGACGCGCAGGAGTTTCT
TCGTTATCTACTGGAAGGGCTCCACGAGGACGTGAACAGGGTCACAGTCAAACCGAAGCC
TATATTGACGGAGATCGACGACAATCTAAGCGATTCAGCGAAGGCAGCCGAAGCCTGGAG
CCGCTACCTGAGGATGGAGGACAGCCGCGTGGGCGACATCTTCGTGGGGCAGCTGAAGTC
GACCCTACGCTGCACCCACTGCAACCACGACAGCGTCACCTTCGATCCCTTCTGGGACCT
GAGCCTGCCGATTCCGGCCCGGACCGGCAACCTGAAGCTGCAGCAGTGCCTACAGCACTT
CGTGCGCGAGGAAGAGCTGGACGGTGACGAGAAACCGACATGCTCGAAGTGCGGCGTGAG
ACGGAAGTGCCTCAAATGGTTCACGGTGCAGAAGTTCCCTCAAGTGCTGGTCTTGCATCT
CAAAAGGTTCTCCCCGACGGAGCGGTTCCGCGGCAAGCTGAGCGTGGTGGTGGAGTTCCC
CCTGAGCGGCCTCGACATGTCGCCCTACGCCGCCGCGCGGTCCGGCGCGCCCGTCTACAA
CCTGTACGCCGTCAGCAACCACTCCGGTACAACGTACTCCGGCCACTACACGGCGTACTG
CAAGCACCCGCACACCGGCGACTGGCACGAGTACAATGACTCTAGGGTAACGCCCATCAG
CCCGTCCAACGTGGTTTCGTCGGAGGCCTACGTGCTCTTCTATGAGCTTTCACGTACGTA
GCGAAAGCTCAAAGCCCGCCCGCTCGCTGGCTCCGCGCGCCAGTGACAGTTGACAGTGAC
ACGCGTCACGCTGGACGACGGGCAAGGGGGTCGTGACACTTGATAAATGTTTTTTTTTAT
ACTTTTTTGTTTTGCTGACGGTACTTTTTTGTGAGTGGAGTTTTTTTTTTTTATAAAACG
AATAAATTATTTTGTTGTTGAAAATGAATCGTCCAGTAGAATGTCGGGTAAATAGTGGTG
GGTGTGGCGTTCGATCATGCGATGGCGTCGCGGGGTCGCGGGTTCGAGTTCCGACGCGAC
CAGAATTATAATACGGACGACAATGTTTGAACGGAAAATTCTTTTAGTCCTCCTTTTGGA
GACTTTTTTTTTTTATTTCGAACGCTACAATCAAATTTTTTTTCATAAAACTCGAATCCG
CGACCCCGTTTTCGGAGAGCTCACGTTAACTAAGTCAGCTGGTAGTTTCGTTTGGAAGCT
CAATAGCGTTTTTGACGGGGCTTATAAATTCGAAGAGTAACTCGCCTAGAATAATCCTTT
AGTATAACTTACATTTTCTATCTGACGGTCATGACTTAGTAATTATAAACAAGAATTCAA
TGTACGGTCCCGTTGTGCTTCAGACGAAAATAATATTCATTTACATTTAACCAAGTTAAT
AGTAAGATTAGTGATTTAATTTTTTTATTTGCATTGCGCATTTACATTGCGTTTTTAGTT
GGGAATAAAATTAGCACTCCATTGCTCGCTCTCCGCGTTCACTCTTGTAATTTATAAGCC
CGAATATCAACGTGCGCTGTTGTTGTCCGCGGGCGACTGATCTGAACCGTCAAGTGTCCT
TCTCGCTTGTCTTAAAGTTTGACCGCAAAAGAATTTTTTTTTTTTTTCGTTTTAGAGCAT
TACACACAAAAAATATGAAGCCTTATCCTGTCAATGATTGTAAATGAACACACAGTGACA
CTGCAATTATATTATTTACATTTGAAATTCCTATCAATTTTAGTCATTTTGTAAATAAAT
AAATTAATATTAATAATATTATTAAAAAAAAAGCTTTTATAAAATAATACACATTATATA
AATAATATACATATATCTATATATTTAAATACGCAAATTGTTAATTGTTTGTTGATGAAT
AAAGGTAATTTATTTATTAATTCAAATTAATTATTGACTAACTAATAAAATTTAATTAGC
TAAATAAATAATTGTTTTCGAAAAGAAGTTGTTACGTTGTTTTGGTGTTTGAAGGCTCTG
CGTCGCGTGAGGCGTTCGCATGCCTTACTGCCAGCCGAGCCTTCTACCTGTCCTGGGTTG
CCACTCGGCCTCTTAGAGGTCGCTATTGAAATATCAAGATTTTATTTATTGATACGATAA
TAATCTAAAAATTATGAAAGCACACCTTATGATCAAACGAAATTTCCACCACCTAACGAT
AGATAAACTGATTTGGAGATTTCCATGTGTACCAAGAAAAATTGTTTTTTTTTTTAAATA
CTTTTAGTTCTTATATAAAATATATAGAACCCGAGTGGAATCGGAGAAATCATTTTTGAC
ATTAAAACCTTATTAGCTTCAGGTAATCTTCCTATATAACACGGTAACTTACAACACGGT
TAATAAATAAATTTTCCCCAAAACCCATCTTATAACACGGTACTCATACAACACGATAAC
GAGAGATTTAAAATCTAGAATCTAGAAAGAAAATTATTTAGATAATTACAACATGCACTA
TGCACACACAATTTAAGGGAGTAAATGAAAATTTATTACTGCTTATTTTTTATGAATACT
GTCTACAATTTGCTACCACAAGGTTCTTGGTTACTTTGGTCACATTTCTCGGCGGTCACC
AGACGACCTTGAAAAATTGGCTGTGGTGTTCAAGGTAGAAGGGAAAAGACCCGCCGACCG
GGCTCCAAACCGTGGGTCAGATTTTTTTTATTGCTTAGTTGG
(5142 bp)

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