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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp13491_c0_seq1
Scaffold_idBomo_Chr23
NCBI non-redundant
(nr)		PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_2-like_isoform_X2_[Amyelois_transitella]
Ontology
GO:0004843 F thiol-dependent deubiquitinase
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048511 P rhythmic process
Transcript
Level		FPKM:10.47 TPM:11.28
ORF EntryO_BomoOtmSK10340_complete:A_BomoOtmSK_comp13491_c0_seq1
Sequence
(Nucleotide)
CGTCAAGCCAATGGAGTCATAGTTGTCTTCTAAAATTACATAGCAGAAGAAAAAATATTT
TCCCTCACGTATACAGTCCATTTTCAAAGAAATTTCGACGAAAGTGTTATGAGTTGTGTA
CGGCGCGAGTGAAAAAAATATAAAACAGAACACCAAACGTTTCAGACATTGCGTTTTCCG
TGTGTAACATAGTTACTTAGTAACGGAGTTATTTTATTAATTCTGAATCAACCAAAGAAG
AAGATGCAAAAAACACGTAAACCATCCAGAATCAAAGCCAATACTAGTTATTAAAAACAA
TATTTAGTACTAAGCGTACTATGTATTTTGTGTATTAAATAGAAAGTATTTAATAGTCTT
CAAAATGTCTTTAGTTTCTTCGTCAAGGCTCGAGGGATCCTCGTCCAGCCTGTCGGGGTC
CTACCGGTCTACCTTGACCTCTTCGTCAAGCCTAGACAATCCTTATTGCAGGCCACGTAG
TGGCTCATATGCAACTTCAACTATCCGATCTTACGGAGACACCGTCACCGAATACAGATC
CAGATATTCCATCGACAGTAAAGGAGATAAGAAGTCTCTGATAGAATACTCTAGAACTTC
CAGAGCTCCAAGCGTGACGGATTCGGACAGCGGTATCTCGTCCAGGCATCGCTCTGACAG
AAGCGAGTCCAGGTCTAGAGATATTTCGACGACAAGGAGCGAGAGCGGCAAAACTCTAAG
CGACCCCCCGTCTAGAACGAAAAGAAATTTCAGCTCGTCTGCTTTCATGAGCACGGCCGA
GCTTTACAAGTTGTATTCGCCGTCGAACTACATACCGTTGACGCAGAGAATACAGCAGCA
ACAAAAGCTTCAGAATCAGAATTACGGGGAGATATCGAGATCAAAGTCGATCTCGAACGA
CATCGGTAGACCACCAGCAGCCGACCCATCACGCGCTCTAAGGAAAGCCAGGAACTCGGC
TATCGGAACCACATCTGAAGAATTGGCCGGAGGCAAAAGCGGTCCTAGCGGCCTGCGCCG
GAGCACCGATCGATCGGAATCACTCTCCGAATCCAGGAACGAGCGGCAGTCAAGTCACAC
CAGTGGTCTGAACGGCCTCAGGAACATCGGCAACACGTGTTTCATGAATAGCGTCCTCCA
GTGCCTGTCGAACACCAAGCCGCTGCTGGAATACGTCTCCGAAGACAAGTATTGCGATGA
CATCAACACGTCGCTGTCCTGCATGAAGGGGGCCCTCATCAAAGCCTTTGCGACGGTCAT
CAAGGAGGTGTGGCGCAGTGGTGAGCGTGACGGGGTCGTGAACACCACCGCCCTGAAGTC
CCAGGTTCAGAAGTTCGCGCCGCGCTTCATGGGCTATAGCCAGCAGGACGCGCAGGAGTT
TCTTCGTTATCTACTGGAAGGGCTCCACGAGGACGTGAACAGGGTCACAGTCAAACCGAA
GCCTATATTGACGGAGATCGACGACAATCTAAGCGATTCAGCGAAGGCAGCCGAAGCCTG
GAGCCGCTACCTGAGGATGGAGGACAGCCGCGTGGGCGACATCTTCGTGGGGCAGCTGAA
GTCGACCCTACGCTGCACCCACTGCAACCACGACAGCGTCACCTTCGATCCCTTCTGGGA
CCTGAGCCTGCCGATTCCGGCCCGGACCGGCAACCTGAAGCTGCAGCAGTGCCTACAGCA
CTTCGTGCGCGAGGAAGAGCTGGACGGTGACGAGAAACCGACATGCTCGAAGTGCGGCGT
GAGACGGAAGTGCCTCAAATGGTTCACGGTGCAGAAGTTCCCTCAAGTGCTGGTCTTGCA
TCTCAAAAGGTTCTCCCCGACGGAGCGGTTCCGCGGCAAGCTGAGCGTGGTGGTGGAGTT
CCCCCTGAGCGGCCTCGACATGTCGCCCTACGCCGCCGCGCGGTCCGGCGCGCCCGTCTA
CAACCTGTACGCCGTCAGCAACCACTCCGGTACAACGTACTCCGGCCACTACACGGCGTA
CTGCAAGCACCCGCACACCGGCGACTGGCACGAGTACAATGACTCTAGGGTAACGCCCAT
CAGCCCGTCCAACGTGGTTTCGTCGGAGGCCTACGTGCTCTTCTATGAGCTTTCACGTAC
GTAGCGAAAGCTCAAAGCCCGCCCGCTCGCTGGCTCCGCGCGCCAGTGACAGTTGACAGT
GACACGCGTCACGCTGGACGACGGGCAAGGGGGTCGTGACACTTGATAAATGTTTTTTTT
TATACTTTTTTGTTTTGCTGACGGTACTTTTTTGTGAGTGGAGTTTTTTTTTTTTATAAA
ACGAATAAATTATTTTGTTGTTGAAAATGAATCGTCCAGTAGAATGTCGGGTAAATAGTG
GTGGGTGTGGCGTTCGATCATGCGATGGCGTCGCGGGGTCGCGGGTTCGAGTTCCGACGC
GACCAGAATTATAATACGGACGACAATGTTTGAACGGAAAATTCTTTTAGTCCTCCTTTT
GGAGACTTTTTTTTTTTATTTCGAACGCTACAATCAAATTTTTTTTCATAAAACTCGAAT
CCGCGACCCCGTTTTCGGAGAGCTCACGTTAACTAAGTCAGCTGGTAGTTTCGTTTGGAA
GCTCAATAGCGTTTTTGACGGGGCTTATAAATTCGAAGAGTAACTCGCCTAGAATAATCC
TTTAGTATAACTTACATTTTCTATCTGACGGTCATGACTTAGTAATTATAAACAAGAATT
CAATGTACGGTCCCGTTGTGCTTCAGACGAAAATAATATTCATTTACATTTAACCAAGTT
AATAGTAAGATTAGTGATTTAATTTTTTTATTTGCATTGCGCATTTACATTGCGTTTTTA
GTTGGGAATAAAATTAGCACTCCATTGCTCGCTCTCCGCGTTCACTCTTGTAATTTATAA
GCCCGAATATCAACGTGCGCTGTTGTTGTCCGCGGGCGACTGATCTGAACCGTCAAGTGT
CCTTCTCGCTTGTCTTAAAGTTTGACCGCAAAAGAATTTTTTTTTTTTTTCGTTTTAGAG
CATTACACACAAAAAATATGAAGCCTTATCCTGTCAATGATTGTAAATGAACACACAGTG
ACACTGCAATTATATTATTTACATTTGAAATTCCTATCAATTTTAGTCATTTTGTAAATA
AATAAATTAATATTAATAATATTATTAAAAAAAAAGCTTTTATAAAATAATACACATTAT
ATAAATAATATACATATATCTATATATTTAAATACGCAAATTGTTAATTGTTTGTTGATG
AATAAAGGTAATTTATTTATTAATTCAAATTAATTATTGACTAACTAATAAAATTTAATT
AGCTAAATAAATAATTGTTTTCGAAAAGAAGTTGTTACGTTGTTTTGGTGTTTGAAGGCT
CTGCGTCGCGTGAGGCGTTCGCATGCCTTACTGCCAGCCGAGCCTTCTACCTGTCCTGGG
TTGCCACTCGGCCTCTTAGAGGTCGCTATTGAAATATCAAGATTTTATTTATTGATACGA
TAATAATCTAAAAATTATGAAAGCACACCTTATGATCAAACGAAATTTCCACCACCTAAC
GATAGATAAACTGATTTGGAGATTTCCATGTGTACCAAGAAAAATTGTTTTTTTTTTTAA
ATACTTTTAGTTCTTATATAAAATATATAGAACCCGAGTGGAATCGGAGAAATCATTTTT
GACATTAAAACCTTATTAGCTTCAGGTAATCTTCCTATATAACACGGTAACTTACAACAC
GGTTAATAAATAAATTTTCCCCAAAACCCATCTTATAACACGGTACTCATACAACACGAT
AACGAGAGATTTAAAATCTAGAATCTAGAAAGAAAATTATTTAGATAATTACAACATGCA
CTATGCACACACAATTTAAGGGAGTAAATGAAAATTTATTACTGCTTATTTTTTATGAAT
ACTGTCTACAATTTGCTACCACAAGGTTCTTGGTTACTTTGGTCACATTTCTCGGCGGTC
ACCAGACGACCTTGAAAAATTGGCTGTGGTGTTCAAGGTAGAAGGGAAAAGACCCGCCGA
CCGGGCTCCAAACCGTGGGTCAGATTTTTTTTATTGCTTAGTTGG
(4065 bp)

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