SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp13482_c0_seq3
Scaffold_idBomo_Chr6
NCBI non-redundant
(nr)		LIM_and_senescent_cell_antigen-like-containing_domain_protein_1_isoform_X1_[Bombyx_mori]
Ontology
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016337 P cell-cell adhesion
GO:0030054 C cell junction
GO:0043066 P negative regulation of apoptotic process
GO:0045216 P cell-cell junction organization
GO:0046872 F metal ion binding
GO:0050680 P negative regulation of epithelial cell proliferation
GO:2000178 P negative regulation of neural precursor cell proliferation
GO:2000346 P negative regulation of hepatocyte proliferation
GO:2001046 P positive regulation of integrin-mediated signaling pathway
Transcript
Level		FPKM:3.01 TPM:3.25
ORF EntryO_BomoOtmSK10313_complete:A_BomoOtmSK_comp13482_c0_seq3
Sequence
(Nucleotide)
GTAAAAAACTTTATTTGGTGTTACATAAATATTTAGATCTAAATTAAATTATAAAATATC
TGTATTATACATTAAAAGGGTTAAAAGCAATATTACAAAGGGTGCGAAACAAGTTTTCTT
TTTTCTTTTAAATCATAATTTTCGTCTAATGTAAGGCATGCTAAAAACGTGACATTAATA
TACAATGCAGTAGCATATTATAGTCAAAAGTAGCATTCTTCAAAATGGAATGAATATAAT
TTTTTGAAATATATTTATCATTTCAGAGGGTTTTTCAAATATCATTTATATCGGTCTGAT
TGTCACTGTCATTGTCCCTGGCTAAGATAATCTTATATAATTAATATTAAAAAATAATTA
GATTCAAATTCATCATTTTGACCACACATTTGCTGTAATATTCAGTTCAATTGGTTTATA
AAAATCATCGAAAATTTATATTAATAATCTTTATATAGTGTACAATATCTACAGATTTGT
TTCCGTTTTGCCTTATGAAGCCAAGCCTTTTGAGTTCATTAATATAAATAGTTAACTTAG
AAATAGTTCTACGGTTATATTTTGTGCTTTTAACACGTTAACAGTCCCGATACAAGCGTT
CCGAAACACGCCATATGTCCAAGTGTGATTATATATTTTTTGGCCATTATTAGATGTCCA
CCTATCGGCTGATGCATTAAAAGTAACAAAATATGGTCGTTGACCCCGGATATACCCGTG
TACAGCGGGCGGTACACGGACTTATGAATTAAATTACCGGGTACCTTTAACGTGTACCAC
AGGCTCATGAGTGTTCCAGTAGACGTATGTATGGTTAGTTTATTACCATATCGATGGTAC
ACTTCCGCGGCAGACTACTTTTCCGCCAATACATACCCTCAAACACATAAATATAACATG
AAGATCTATAAACTATGGTCTGCAGAACACTTCGGGATACCAAATTTACAATGGTCAAAA
TGTGCAAGTTTTTGGTTTGGATACCTCCGGAAGTATAGTAATAACATTGGCAGAAGGTTT
ACTTGATGAAGGTCGCTGCATGATAACTGACAACTACTGCACGAGCGACCCTTTGACAAA
ATTTATGCTTTCTCGCAATACAGACGTCTGTGGCACAGTCAATAAAAAGAGAAAAGGTTT
ACCGAAAGAGAGAAGGAGAGAAAAGCATTCTAGCAGCACATGAAACGTTCAAGTTCAAGT
TACGCCGCTGAGAAAAACACATTTTTTTGAGTTTTTGGCCAAGAAAGAATCTCGATTCAT
CCGAAGACGATGCGTGGGATGCTGCCAAAACCTTCTTAATGAAGGTCGACTTGCTCCATA
TGCACAGGCCAAAGCCAAAAGGGTATCAACGCAATGTAAAATTTGCAAAAAAGAATATTG
CGTTGTTTGTTTTTCTGAACTTTTAGTTCACCAATTAAAATTTGTGTTTTTTTTCCTAAG
TTTTTTTTATGTCGTGTTGCTATACTAAGAATTTAAAAAAAATATGACATGTTTTCGACT
TTCTCCATTTATTAGATCGTTGGCCACAAGTCCACAAAGAAGACACTAACTAATTTGACA
AGTCCGTGGATCTAGGCCCCGTAGAGAAACATATCGGCTCGTGTACCTCATAGGGTACAC
TAACTCGGCAGAACCGCTCAACGTGTACCACATACGTAACACCGGACTGTTAACGTGTTA
AATTCAGGTTCACGTGACTAAACTGATATTTTGACTTAATTAAAAACAAAGTTTACGAGC
ATATTCAACAGATACATTTTATTGCCAATAGAGTTAAATCGACTTATAGCTCATCTGATC
GTAAATAGATAAGAGCGACTTCAAAATAAGATTTTTAAAAGAGTCAAATCAATAAATAAA
TCCATTGCACTTGAACAAAATAGCGAACGCGTCAATGATCAGTGCGAGTAAAGACAACAT
TCATAATCATTATATTTTGTATGGTATAAAATAATTAATTATTACATTTTACACTTAATA
TATTACATTAATAAGTTTAGTTGTTACATAGTAGGTACTTCAAGGCACAAATGGCAAGTG
CATACTACATTTATTATATTTTTAAATTTGTTAGTTAATTATGTTAAAAAAATGTGAACA
CCGACATTACTGTGGTATAGTGGTTTAGTATAGTATAGACCAGTGATGGGCAAAGTACGA
CCCGCGGAAGTATTTTAATCCGGCCCGCCGAGAGTCCGTCCGTCCCAAATATTCTAGTCG
GCAGTTTGGCGCGTAAAATAAAATCTGACGTTTATAATTGAAAATCTTCGAATTTTTCAA
AACTCCCCTCAAAACACCCCTGACGAATTGGAGCTTTCATTATCTCATTTATTGGAGAAA
AAAAAACATTTTTCTATAATTCTGGCCCTCCTCTAGTATTTCCTAAACATTGTGGCCGCC
ATTAAAAATGTTTGCCCACCACTGGTATAGACAGATTAATGTCGTTTATTCCTTGTATTT
TTCGTTAACGGCGGACCGTGTAGTGATGAGCCCGACGTAGCCGACGTCGTAGTTCAGCCG
GGAACTTCTCGTAGCAGCGTCTACAGGCGGGCCTCTCGTCGTATTCGTAGAACTTGCTAC
GCGTGCTCAGCGGCGCATCGCAAACGGAACACGCAAAATGATGTACGCACCAAGCCTTGT
TCAATGCGGTGAATACGTCGCCGGCGATAACTTGATTACAGACGTAGCACAAATTGCCGA
ACAACTGGTGATAATGTTGTTCGCAGTAGGCCAAGCCTTTCTTTTCATAATGACGATGGC
CGTGAAATGGTTTCTCGCATTTGGCACAAACGAAATGCTCAACATGCCAATGTTTCCCGA
GAGCAGTAACGATTCTCTCCTCGATGGGACGTCGGCAAGCACCGCAGATTGGAATACCCA
TTTTATCGTGGCAACGAAGACAAAAGAGGTTATTAACATCATTTGCAGCATATCCAGGAC
GATTTTTCACTTCTCTGGCTGTATGATCCAGCTCAACTCCACAGGTAGCACAGGTAAAGT
GATAGCCATGGTAAACTTCTCCCCGATAACGTAAAGGTTCTCCGTCAATTACTCCATGGC
ACTTATGACACATGTAGTTCTGCAGCCCATCCGCTTTGATACGCGCGTTACATACATGGC
ACAATGCTCGACCAGCATGCTTGATAAAACCGGCATCTGCAAGCTCTACATTACACTCTT
CACATCGGAAGCAGGCCGGATGCCAATTAGAGTTCATCGCCTTTATAACGCGGCCAATCA
CAAACTCTCCACACTTTGCACAGCATGGTGCAAATAAAACTTGGAAATCCTGTTCACAAT
ACTTTCGTCCCTCAAATTCATAGAAGACACCATCAGGAAACATGCGAAAGCACTGGGCAC
ATACAAAACAATTTGTATGCCATAATTCTCCATTGGAGTTCACAATTTTCTCATTTGGCT
CAAATCCATCCCCACAGCGAGTACAATACATATTATCAAGAGACATGGTAGCTAAGCCAG
GCATTTTTCACTTCAAATGTACTCAAATCTAATTAACGAGAACTCCAGAATACTTCTGCA
GGAAAGAATTACATTACTCACAAGTCAACTAATACAATTAAACAAATGAATAGTCAACAA
CTGCAATTTAAAACATAGGTTGTAACTAAATG
(3632 bp)

- SilkBase 1999-2023 -