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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp13480_c1_seq1
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		ring_finger_protein_5_[Bombyx_mori]
Ontology
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006914 P autophagy
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0036503 P ERAD pathway
GO:0036513 C Derlin-1 retrotranslocation complex
GO:0044390 F ubiquitin-like protein conjugating enzyme binding
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
GO:1904264 F ubiquitin protein ligase activity
Transcript
Level		FPKM:17.20 TPM:18.54
ORF EntryO_BomoOtmSK10307_complete:A_BomoOtmSK_comp13480_c1_seq1
Sequence
(Nucleotide)
TTAAAAAACTCGCACTAAGCATACAGAAGAATGGCGACAGTCCAATGATGTTTTATTTTT
TAAATTTGTGTTTGAAAAATGTGTACGGAGTTGAGAGCACTGTGCCGTGAACCTGCACGT
TTCCAAAACAATACTCATCTTGAGCACAGGTGAGCTTTACGGTATGTCATAGTCCTGATT
AGTGGATATTTATCGACATTACAACATTTGTGATGTCATTCTAACAGGCGCTCTGGTGGT
GTTTTTTCTTATTTCATTTCTATGCGTCCACCTCACAAGCCACTCGGCGTTTAGTGCTCA
TCGGCGCTCACGGACGCCACTCGATCGCTGCTCGAGGCGTGAGGTCGAGCTCTCGAATTG
TTTCGTGTTTGAACTGAACGCGATATTGAGCCGTAAATATTTTCGTTCACTCGTCAAACC
TCAGAAATTAAATGATTTCTTTAAGCCAGTCAGAGTTTTTACGTAGCGGTTGTTATCTAA
CTAAAAACACCGAAATATATTTGATTTTTTTCTCAATAATCAGTTGATTGTGTTATTTAA
ATATTTAAAACTTCATTTATTCGTTTGGTTGCTACAGTGACTAGCTTTAGTGTTAACATT
ATGTTTTGTTATTTCTGACGTTTATAATACTCGTAATAATTTTTGTTCTACGTATTTTTA
TTTAACGCAATGTTAAAAACTGTGGGAAATATTCTGTATTCAAAACGGCGCAATTAATGA
AATCAAATGATGAGATACGTGAGACTAAACCGTAGGTAAATTGTAAATGTTTTCATTTCG
CACGGCTCGCGAATATCCAAGAACATACGGAATATTTACATAAATGTTTTCGCTTTTCAG
TTCTAGTCCAGATCCGCGCCGCATTTAATACTCGCACAGAAATATCATCGCATAAAAAAT
ATTTCGAACTAAAATGTGTAGGTATGTACCACATCAAGGGTTTTTGATCTTTTTCCCTTC
ATTTGGTTTAGTGTAATGGCAAAAAATAAAAAAGTTTACTGTTGATAGCCACATTCAAAT
TGGCGGTTGCTGATGGTGACACGCTATTGCTCTTTTTTAATTTGACAAAAAAAAAATGTA
ACAAATTCCCAGATATCGTTCTCATCACATAAATATACAGATAAAAGGTTCGGTGTCTTT
AATTAAATAACCACGACTTGATCTGTCACTGTCAACAAAACACTACCGTAGTCACAAGAA
TCAATTTTGAAAAGAACTTTTCAAGTATCCTTCTATTAAATAAATGTTTACAGAGTTAAT
TAGTATTGTAACCTGGTGGCAGTACTTGTGGGCGGTCAGGCGAACACCAGCCACAGCACG
AACAGGATCGCGACCCACAGGAATATCTTCGATAGGAACTGCTCTTCTTCGAACTGGGCC
GTGCCGCGCGGCGCGGCGCTAGGCCTTGGATCACCAAAATTAAATGTCGAGGTGAAAATT
CCAAACGGGAAGGCTCCTATCCCGAACGACATGTGGAATCCCTCGCCGAAGCCGAAACCT
GGGAAGCCGCTCGTACTCTCCGGCTCCGTGCGCTGTCCTGCCGGCCGGGGGGGCACCTTG
TTTCTTGGGTCTTCCTGCTTTGTGTTTCCTCTTCCATAGAGCGGGATCACTTTCTCTCTG
CTGATGGCAGCCTTGCAAACAGGACAGACTTGCCGACTGGGTCTGGTTTCCAACCATTGA
TGTAAACATGGCCAGCAGAAGAGGTGGCCGCACATACTGACGACTGCATCACGGGCTGTG
TCCAGACAGATGTTGCATTCTAGCATTCTTTCGTCATGTTTGTCTTCTTCGCCACCAGCG
TCGCCCCCAGGCGCCGAGGGGCTCGCTCGCGCTTGACTAGTCTCCGCCATTTCCCACTTT
AAATTTGATGTTTGAGTTTATTATTTCATATAGAAACTTGTTAATAAATAAATAAATCAC
ATTTCCAATCCCGTGGTATGCTGATTGCTG
(1950 bp)

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