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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp13437_c0_seq1
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		loquacious_isoform_X5_[Bombyx_mori]
Ontology
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0016442 C RISC complex
GO:0030422 P production of siRNA involved in RNA interference
GO:0030423 P targeting of mRNA for destruction involved in RNA interference
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0035197 F siRNA binding
GO:0035198 F miRNA binding
GO:0035280 P miRNA loading onto RISC involved in gene silencing by miRNA
GO:0042803 F protein homodimerization activity
GO:0046782 P regulation of viral transcription
Transcript
Level		FPKM:25.65 TPM:27.66
ORF EntryO_BomoOtmSK10118_complete:A_BomoOtmSK_comp13437_c0_seq1
Sequence
(Nucleotide)
GGCAACACCAAAAATTTATTGAAGTTACAGCAGAAATAATATGAAGTTCATAATGTTTTA
AAATAATATAGACTTCATACATATTATTAGCAGGTGTGACAAATGTTAAAAAGCCATGAT
ATTATTATATTTAGAGCTTAATTATAATTAATAACAATAAGTAAAACCAAGACTCACTAA
AGAAAAAATAAAATAAACGTGGAACAACCAAAGTCCTTACGGCCGGACAAAATATTAGTT
TTTATTTAGTTGGGTCTTGGTTGAACAGAACTCCAATCCTTTACTCGAGTAGTCTTTTCT
AACTTGAACAGTGCGATGTTTTATAAGGGCAGGTTGAACTCACACCATTCAATTTAAAAG
AAACTTGGTGCGTGCAGGTTCCTCGTCGGTGCCGGGATCACAAACATCGACGACGACACT
GTACAGGTACAAATTGTTACAACCTCTATACTTTGCATTAAAATAATGCCCATTTTCACA
GGCAAGGGATCCTCTCTTTACAAACTCTTTACAGTGAGTGATGCATCTCACTCATACATT
TAGTATTCTACTTCCCTGCAAAGTTTTCCATCATGTACACAAAAGAAAACTCACAATCAC
TGGTATCAAACAAAACGAACAACGACCTGTAATCCTTCAATACCATCCATGTTCCAACCC
TTGCACTTTGTAAAAAGTTCTTAAAGTTCAAGTGAATTAATTGCTACGTCGGAGCTTATT
ACAAAGCAAAGGTCGGGCAGTTCGTCAACAAGACACTAGCTGAAACTATTTTCCGTTTAA
TGCTCAGCATATTAAAAAGGCTTACCAATGATAGTTAAAATTCATAGTTCCTAAACATGA
ATTTACGAAATAAGTCAAACATACTGACTTCGCCGCAATAATAGTGTTAATTTATAGATA
AAATAGATTAAAAGCTAAGATTGAGATTATACTTTAATAATTAAATATGAATGCAAAAAA
CATGCCTAAGATGCTGAATATTAAACTGGAAATATATGTAAATCCACACTTTTTTTTGTA
TTTTCATTTTATTTCATTTTTTTTACATTTTTATAACACGTAATTTCCACGCTGGGAAAA
TTACACTAATTCTATGCAAAGTATAGCTTGTATTTTATGACAAATCACTCCATACTTTGT
TTTTTAAGATTACGGGCTATGCAATTTATCCTCGCACATTGGCAGTAGTTTTATTAATAA
ATAATGAACTTTTACTTGCAAATTATTAAAGGATTTAATTTCATCACCATGCTAGTTGCC
AGAGTGACACTTTTTTACGGCCGTTTCGCTTAAAATCGCTTAAATGTTTATTGCTCTTGG
TGGAAATAAATGTCTGGGGAATACAAAATAAATTGACTGCTAAGAACGGTTTTTAAGCTT
CGGTTGATGAGCCACATATCGCAGCACTTTGTTAACACTTCAGTGAGGAGTTAATTATAG
AATTGAATAGCTATCGCGAAAATTATCTCTTGAAACGGGGGAACAATAACAGAGTTGAAA
ATAGTATCTCAGTGAAGTATATAGGCTCCGGTAATTCCTTAACACAAGATTGGCCGTGAG
CTCGTTCACTTATCTTAGCAATAATTTTCAAACTGCCTACCATAAATTAACCAAAAAAAA
TAAAACAAGTTGGTTACTGCAAACATGCCAGTTATAAAGCATAGCCCAAAGTACTATTGG
TACATAGATGCGTACTATTAATGCCATTATTCATATGGAAAGTGATGCAACAATATGAAG
GCTCAAAACCTAACGACATCAATACAAAACACATAGTGATATGGCCTGCATTAAAATTAA
ATCTCATAACGTTAGAGCCCATAGATCAAATGCATAGGTCGTCGCACTGGTCTTTGCTGA
TGTCGTAAGATGTTGAAAATTTCACTTTTTGGTCATAATCTTGAGATACTCCAAGGCGTT
CTGAGCAGCAGATGACTGGGCATCCTTGCTGGTGAGGCCGGCTCCGTGGCATACAGCTAC
TGGCAATGTGGAAAGCTGGACAAGACACTGACATAGACCAGTCATAGACTTTTCTTCTAT
GTCGACATAGGTCACCTCAAAAGATTGCTCTGATGCTATTTCTTGCAAGAACTGAACGAA
GTTAAAATCCTTATTGTTTAGTGGCGTCACCTGCAACTTGGCCAGGTTGGGGCCAACAGA
CTGTTTGAGATGTTTGTGGAACTGCGACACTTTATGGCTATGGCTCGTGGTCAATGTGGA
GATTTTACTATCTTTCAAATCGGCATAACGGGCCGCAACACCGCCCTCATCATCATTCTG
GAAGGATTCTGGTGGGTTGTCCTGTAAGGCCTGCCACATCTTGTAGGCAGCTTGCCGTTT
AGCTAATTTCTTTGACTTGCCTGTACCAACTTCACGGCGCTTGAGCAATGTGCAAATGAT
CGTAAATTGACGTTCATGGGGCAAACGTCTATTAACATTGTCATCGTTTTCAGCATGGTA
AGATGGTGGTGGCCAGAATCGTGACATACACAACTCCTGAAGCCATCCAACAGGATTACC
CATTAGTTTATCTTCAAATGTAGGTACTACAGCACCAGTTTCAGGAACATTGCCATTGGT
AGTCTGATCAGCTGGTGTAGCACCAGTTAACTTGTCCAGTAAAGCCTTGGCTGCAGAGTG
CTTTGCCTCTTTTTTTGAGCGACCAGTGCCCATTGCAACTAAATCAGCCACAGTTACTCT
GTACCGGAAAGTGGGTTCATGTATCATGCCTTCTATCTGGACTAGTTCATATTTAGGAAC
AGTTCCACGACGTGCCAACAGCTCTTGCAAAACAGAGACAGGAGTCTTTGTAGGAAGTGA
TTCCATTTCCCTCTTGGCGGCCTCGTCCAAAGGCAATCTTTGCAAGTTATTAGGTTTGGG
TCGGGTCTGATAGCGGCGTCTTGGACCGTGAGGAATGTGTTCACCGTTCGGTCCACTGCC
GTGCACTGTCATTCCATGGATAACACCGGGTGGTAAACCCGGGACCACAGATGGATGCGG
GTGGACCGTATTCCCTTCCATTTTTCCCACAGCCGTAGTTACAAATGTATTTATCGAAAT
TTGCTATTGAAAATAAAACGGATACAATACGAAAGATAAAAGAGAACAGAATTAGATCTT
CAGTTTCGTAAAACAACCTATGTAACCTGCACATTAAAATTATGTGAAGTGAGTGAATGA
AAA
(3183 bp)

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