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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp13404_c0_seq1
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		broad-complex_core_protein_isoforms_1/2/3/4/5_[Bombyx_mori]
Ontology
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001752 P compound eye photoreceptor fate commitment
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0006914 P autophagy
GO:0007275 P multicellular organism development
GO:0007458 P progression of morphogenetic furrow involved in compound eye morphogenesis
GO:0007552 P metamorphosis
GO:0007562 P eclosion
GO:0008219 P cell death
GO:0009608 P response to symbiont
GO:0010629 P negative regulation of gene expression
GO:0010906 P regulation of glucose metabolic process
GO:0030707 P ovarian follicle cell development
GO:0035070 P salivary gland histolysis
GO:0035071 P salivary gland cell autophagic cell death
GO:0035072 P ecdysone-mediated induction of salivary gland cell autophagic cell death
GO:0035075 P response to ecdysone
GO:0035193 P larval central nervous system remodeling
GO:0040034 P regulation of development, heterochronic
GO:0042332 P gravitaxis
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048477 P oogenesis
GO:0048747 P muscle cell development
GO:0048808 P male genitalia morphogenesis
GO:0048813 P dendrite morphogenesis
GO:0071390 P cellular response to ecdysone
Transcript
Level		FPKM:6.72 TPM:7.24
ORF EntryO_BomoOtmSK10036_complete:A_BomoOtmSK_comp13404_c0_seq1
Sequence
(Nucleotide)
GAAAAAGTCAGTGTCAAATCAATGGAGGTCATTGCATTTTTGTGCATTTTCTAAAAAAAT
AGAGAAGATTTGAATACGTTTTCACAGAAATTGAATGTTTTATTAAAATGTAATTTACTT
TACGGAACAAGTTTATATAAATTGAAACCTTAAGAATGGCCGACCAATTTTGTTTACGCT
GGAACAATTTTCAATCGAATATTGTGAGTGCATTGGATTCCTTAAAATGTTCTGAAGATT
TAGTTGATGTGACGCTTACTTGTGAAGGTAGAAATATCAAGGCCCACAAAGTCATTTTGT
CAGCGTGCAGTCCGTACTTCAGGAATGTGTTCAAGGAAAACCCATGTCAGCATCCAGTGA
TCATTTTGAAAGATGTGTCTGCAGATGATATTGTGAGCTTGTTGTCATACATGTACCAAG
GTGAAGTTTTCATTGAAGAGAGTAAATTGTCTTCATTTCTTCACACTGCTGCCTTATTGC
AAGTGAAAGGACTTACTGGAGTAACTCAACAGAAAGAAAACTTTACATCACCTAATACAT
CAAACAAACTATACACTCAGTTAACAATTTCATCAAGACCACACCACAATGCCTCCCACA
AGGATGCAAAGTTACCAGGACTAAAGAAACGCAGAAGCAGCACTTCAGACAAGCCAAATG
ATGTGTCAGTCGGTGACAGTTACAAAAAAACCAAGGTCCTGGATACATGTGATATTCCTA
GATTAAACAATTTTTCACAATCTTCCAAAATTGACAATGTGCTTCCTGTTGAAAACAATG
TTGACAAGAAATGTGATGAAAAAAATGACTCTCCACTAATAACTGCCAATGGGAAAAGTA
CATCATCTCAGGTGCATGATTGTTCAATACCAATGAAAACCGAAGTGCTTGATGATAATT
CAACTGAATTATCAACTGCCATTCTATCAGAACAAGATGACAGCCTTCCAGATTATGAAA
ACAGCATGCTTGCAAGGTCCTTGTTATCAGGAATTAATCCTTCAAAAAGTGACAGTGCCA
GTAATTTATCAGGAAAAAAACCAGTTAATATTGGAGAAATTGGTCCCAGTAGATCAAAAG
ATTCAAACACTGAAACTGTTTCACACAATAATTCATCTAGGAGTCCAATAAAAAACACAT
CTGATGAAGTACAAGTAAAACCAGAAAGACAGTCACCAAAATCTGATGTGGAGTATGAAC
CAGAAGTACTTCTCTCTGAACATCAAGATGGTGATACAGAGAACACATATAATCAAGAAC
AATCGCAGGCTTTATTACTACTTGCTGGCATGTCCACTGTACCAGGTTTGGGAGGTGGAG
CTTCAACATCGCAAATAATGTCCCACCAACAATCTAACCATGCTGCTATTTGTGGGGATT
GCCCTCATTGTGGAATGAAATATTCTAATCAGTCAGCACTCAAATATCATGTAAGGTTAA
TGCATTCAGATTTAACGAATAGATTGTGTTGCTATCTGTGTCCAAGATCGTTCACAATGC
GTGAAACTTTTAAGGAGCACATGTGGACAAGTCATGGTCAAAGAAACTAATTATTTAAAT
TATTATGGTCTTATATTACGTGCCTTAGCCTCAGTCCCTTGTCAATTAGGACAAGCCACT
ATATAAGTAAAATATTTTTAAAATGTGCCTTGTTAATAAAGTATTGGCAATGAAATCATA
GTGATTGTTGTCAATTTTGTTGAAAGTGTTTTCGGCCATCTAATGTTAACTAGAAAGAAA
ACACCTTTAAAATGAGGAACGATATTTATAGGTAAATTGCTGAGTACAGGAATGTTCGAG
TATTTTTATATACCACAATGGACACTTAGGAATTAAAATTATTTATAACATATACTTTTC
AGTGATTCTGAAAGACAATTTATTTGACATGAAAATGTGTATGAGTGAGTTAATTTACTT
ATGTTATATATGCTGGAGATGGTTCCTTACGAGTATGGTTTTAATTAAAAAAATAAGCAA
GAGGAAATTTGTTGGGCCTCTAGTATGTCCGTGTCGAAATTCAAACATAGTTCTTATAAA
GATAAAATTGATCCGTCTAATACAATTTTGTACTAAAGTGAATTAAATATTTTAATTGAA
TTGATGTAAGTAGAGACTGACGTTAAACTCTGCAGTGTTTTAATGTAAGAAAAGATCAGT
TGCTTTTTTTTCTATTTGATATAAAATTATTTTTACACTAAGTAAATTTGTTTTTGAGAT
TTTCAGAAAAAAATATTTGGTGCAAAACAAATGTGATTGGTGCTAATATATTTGGTGTTC
TAAAATTTGACCGTTAAGTTTATAGATTATTAAAATCCTTTTAGTTATAATTATGAGCAA
GCTCATATTTTATAGTTTTTAAATGGTTATTTTTTTCTCAATAATGTACGTATAATGAAT
AGTTATGTAGTATCCAATATTTTTCTTTATAGAAATTCATATAATTTTTATTGCTTAACA
TTTTAAATGTAATGTTGGTTACCGCCAGCATAAGAAAAGTGCTATGTTTTGTTTCCATCT
ATATTTTTATTTAATTTGTTCCTAGTTCAAGTCTTGATGTTACAGGTTTAAGACACCAAA
TAATTTGAGAATATTTATTGACTTACATTGAATGCTATTTAGTTATTTATTTTTTATGGA
AAATTTATACATGTGTGCTGACCGACGGAGCTTAACATACAGCTATGTAAAGAAGGGAAT
CAATTAAAAAGTTAATATAAAGTTTCTGTCTCTGCTATTGTTCGCGCAATAATCGAAATA
CGACCATAATACCGCAAGATTTAGACTAATTTTGTGTGCCACATGTCCTCTTTTGCTTTG
TTCCTAACATTTTGAGAAAGAAACTTTAATTAATACTGTTATATATTATTATATTACATT
TATAATATGTTTTTAATTAATAACAGTACAAAAAATAAATCGGACGGCAAATAAAGGAGA
AAATGTACCAATTTTTATTTATCTAAAAATGATGGAATCAGTACTGTGTCCATGATTTTG
TTACAAAATCAGTCACTTAAACAACGAGCTGTAATACTAAGGGAATATTTTTAATTAATT
TTCGCTTCAATTCTACACCACGTATCCTGTTTGGTTAAATATTATTTTGTTTGGTTAAAT
GTGCCAAAACATATAAAATACGAACCGATATTGAAAAGTTTCAATGTTATTTTTAAGTTA
CCTGTAGTAGTATATTGAGTAGATTGTTTAGTTTACGTAAAATATTTAAATGAACTCTTA
TATTAATATATTTAATTTTGTTATCTCAACAATGTATTTGTAAGAAAAATTATATCGACT
CGATGCGCCCAACGTATCGGATGCCATTAGTGAAAATTTGTTAATTAATGATTAGTGATT
AAGATAGATTATGAACGTACATTATATTATAATATTATGTACCAATTTAGTATATTAATA
GTTTTAATGGAGA
(3433 bp)

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