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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp13398_c0_seq1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		alanine--tRNA_ligase,_cytoplasmic_[Bombyx_mori]
Ontology
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004813 F alanine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006419 P alanyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0016876 F aminoacyl-tRNA ligase activity
GO:0043039 P tRNA aminoacylation
GO:0046872 F metal ion binding
Transcript
Level		FPKM:24.14 TPM:26.03
ORF EntryO_BomoOtmSK10028_complete:A_BomoOtmSK_comp13398_c0_seq1
Sequence
(Nucleotide)
TTTTTTTTTAAATTGTGAACACTGCGAATCACTATCGCTAATTTGTAAGCTGTTAGCTGC
GATACAAACTTTTTATTTTCTGTAAGCATTTTTAGTGCTGATTTGAAAGAAACTGAAAAT
GGATACTTCTATGACTGGCAATGAAATACGAAAGACATTTATTGATTTTTTTATTAAAAA
GGGTCATAAATATGTGCATTCCTCGTCTACCATACCCTTAGATGATCCGACATTACTGTT
TGCAAATGCAGGGATGAATCAATTTAAACCAATTTTCTTAGGTTCCGTAGATCCAAACTC
TGATATGGCTCAGTATATTCGAGTAGTTAACACCCAAAAATGTATTAGAGCAGGTGGAAA
ACACAATGATTTGGATGACGTAGGAAAAGATGTATATCATCATACATTTTTTGAAATGAT
GGGAAACTGGTCATTTGGTGACTACTTTAAAAAAGAAATATGTGCTTGGGCTTGGGAACT
ATTAACTGATGTTTTTAAATTATCTAGAGAGAGATTGTATGTAACATATTTTGGAGGAGA
CCCTTCATCTGGTCTTGAACCTGATCTCGAATGCAGAAACATTTGGTTAAACTTGGGAGT
CCCAGAGGCACACATTTTGCCTGGAAGCATGAAGGATAATTTTTGGGAAATGGGTGAAAC
AGGTCCTTGTGGCCCGTGTTCAGAACTACACTATGATCGAATCGGAGATCGAGAAGCTGC
CCATCTTGTAAACATGGATGATCCAGACGTGTTGGAAATTTGGAATCTAGTGTTTATCCA
ATTCAATAGGGAAACAGATGGTTCCCTGAAATTATTACCAAAAAAACATATAGATTGTGG
TTTAGGTCTTGAAAGGTTAGTATCTGTAATTCAAAACAAACGAGCTAATTATGATACTGA
TTTCTTCATGCCAATATTCAAAGCTATTGAAAACGCTACTGGTGTGAGACCATATTCTGG
AAAAGTTGGGGTTGATGATGTTGATGGAATAGACATGGCGTATCGTGTCTTGGCTGACCA
TGCTAGAACTCTAACAATTGCTTTATCAGATGGTGGTTGCCCTGATAACACAGGTAGAGG
ATACGTTCTTCGTAGAATTTTGAGAAGAGCTGTGCGATATGCGTCAGAAAAATTAAATGC
CAAGCCTGGATTTTTTGGATCTTTGGTTTATACTGTAGTTGAATTACTAGGTGATGTTTT
CCCAGAAATTAAAAAGGATCCAGATTCCATTGTGCATGTCATAAATGAAGAAGAAGTGCA
ATTTTTAAAAACCCTATTGCGAGGAAGGAATTTACTTTACAGAACAATAGAGAAGCTCAA
TAATTCGAAAACCTTACCTGGTGACGTGGCATGGCGTTTATATGATACTTACGGATTTCC
TATTGATTTGACTCAATTAATGTGTGAAGAAAAGGGTCTTAATGTAGACATGGAAGGTTA
TGAAAAATCCAGAAAAGAATCTCAATTAGTTTCACAAGGAAAAGCCGCAGGCCAGGAAGA
CTTGATAGCATTAGATGTACACGCTATTAGTCATCTACAGGATACTGGAATTCCTGCTAC
AGATGATTCTCCAAAATATAATTATTTACCATCATCTACTGACAAAGATGCACTCTATAC
ATTTGCTCCGTGTACAGCAAAAATTGTCGCATTAAGGAAAAATAAGGAGTTTGTAAGTGA
AATAAGTTCTGGACAGGAATGTGGTGTAATACTAGATCGCACTAGCTTTTATGCTGAACA
AGGAGGCCAAATCTTCGATGAAGGTTATATGGTAAAAATTGATGACGAAACTGTTGAATT
TACAGTAAAAAATGTTCAAGTAAAAGGAGGCTATGTTCTCCACGCAGGAAAGGTCGAGGG
AATTTTAAAAGTAGGAGATACTCTATCCCTGCACATTGATACAGAAAGACGAAGACTTGT
TATGAATAATCACACTGGAACCCATGTTCTTAATAACGTTCTAAGAAAAGTTCTTGGCAA
TGATTCAGATCAACGTGGATCGCTAGTAATGCCAGACAGGCTTCGATTTGATTTTACTAA
TAAAGGTCCCATGACAATAAAACAGATCAAAGATACGGAAAACGAAATAAAAGAAATCAT
TGCGAAAAATAAAACAGTATACGCAAACTACACAAGCTTGTCTGAAGCAAAAAAAATTAA
CGGACTGCGGGCAATGTTCGATGAACATTATCCTGATCCAGTTAGAGTCGTATCAGTAGG
AGTACCCGTGGAAGACCTTATAAAAAATCCAGACGCTCCTACAGGATTCGAAACATCTGT
TGAATTTTGTGGTGGATCCCACTTACACCGGACTAGCCATATTGGGGAATATGTCATTGT
GAGTGAAGAAGGTATTGCAAAAGGAATCAGAAGAATTGTTGCAGTGACTGGACCAGAAGC
GATAAAAGCTATCAACAAATTAAGTGTTCTTGAAAACGAGGTTAATAATGTTGCCAATTT
TATAAAAGAACAAAATGAAAGTATTTCTCATAAAGAAGTATCTAAGAAAATAGTGGATTT
GACGAACGAGATATCCCAAGCCCAAATATCATATTGGAAAAAAGATGAATTAAGAAATAT
GCTGAAGAACTTAAAAAAACAACTAGATGATAAAGAAAGAGCCGAAAAAGCTATAATTAT
TACTCAAGTCACAGAAAAAGCAAAAGAGCTATGTCTTGAACGCAAAGAATCAAAATATAT
TGTATCCGAATTAAAGGCGTTTGGAAATACCAAAGCTTTAGATGGTGCTTTAAAACAAGT
GAAACAATTTTGCCCAAACTCAGCTGCGATGTTCTTTTCTGTTGATAAAGACGCTAATAA
GATTTATTGCTTGGCAGCTGTGCCCAAAAGTGATGTAGAAAAGGGATTGTTAGCTTCAGA
ATGGGTGCAATCCGTTGTAGACATTATAGGTGGCAAAGGTGGTGGCAAAGCTGAGTCAGC
TCAAGCATCTGGGAACAATCCTAATAGTTTAAATGAAGCTATCCAAATTGCAAATGAATA
TGCTAAGTCTAAGTTAAATTAAATAAACGTACAACACGTGCATAAATATATATTATGTGA
ATATTGTTTTGTCAAAATATAAATAAACTGTGATTAAAATAAAA
(3104 bp)

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