SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp10376_c0_seq1
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		cysteine-rich_PDZ-binding_protein_[Bombyx_mori]
Ontology
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0008017 F microtubule binding
GO:0014069 C postsynaptic density
GO:0030054 C cell junction
GO:0030165 F PDZ domain binding
GO:0030425 C dendrite
GO:0031122 P cytoplasmic microtubule organization
GO:0032403 F protein-containing complex binding
GO:0035372 P protein localization to microtubule
GO:0042995 C cell projection
GO:0043025 C neuronal cell body
GO:0043197 C dendritic spine
GO:0043198 C dendritic shaft
GO:0045184 P establishment of protein localization
GO:0045202 C synapse
GO:0097110 F scaffold protein binding
GO:1902897 P regulation of postsynaptic density protein 95 clustering
Transcript
Level		FPKM:3.60 TPM:3.88
ORF EntryO_BomoOtmSK5445_complete:A_BomoOtmSK_comp10376_c0_seq1
Sequence
(Nucleotide)
GGATTAGTAACAACATCAACTTAAATAAATTTTATTTCTAACAAATATTAAGTGTATTAA
CTATGATTTCTTAATAAAACTAGCTGTTCACTAGCAGAGCATATTTTAATATTTGATAAG
TAATATTTAATTAATATAACCTACATATTATTCAGTCAAAACAACAATTTAATAAAATTT
CGTACTAATACAAGCTCGTTAGGTTAGTAAGAAACAGAACAAAAATGGTTTGTGAGAAGT
GCGAAAAGAAATTGGGCAGAGTAATAACGCCGGACCCTTGGAAGGCTGGAGCTAGGAATA
CCGTGGAGTCCGGCGGACGTGTTGTTGGAGAAAACAAAGCATTAACCGCCAAAAAAGGAC
GATTTAATCCGTACACTTCCACATTTCAACAGTGCAAAATCTGCAGAACGAAAGTACACC
AGGTCGGATCACATTACTGCCAAGCTTGTGCATACAAAAAGGGTATATGTGCCATGTGTG
GAAAGAAGATTCTAGACACTAAGAATTACAGACAGAGCTCAACTTAGTTTATTGTTATGT
TATCCTAGTTCATAAGAATTATTACCTAAATAAGTTCTAAAAGAAAATATATAGTGTATT
TGTTAAGCAATGCCTTGGAGTATTTATAGATAGTAATAAAGATACTGGAAATTTCCTCAC
GGATGGTAAAGTATGATTGCTTCGAGGAATAAACAGATAGGATTGTAATGCCAACCTATG
AACACCCACAATTAGCGGTACTACAGATAATCAAGACTTGAATCCAAGAAATCGATTTCA
AAAATGAAATGAGAATAATTCTAACAC
(807 bp)

- SilkBase 1999-2023 -