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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp10372_c0_seq1
Scaffold_idBomo_Chr14
NCBI non-redundant
(nr)		Hermansky-Pudlak_syndrome_5_[Bombyx_mori]
Ontology
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0006622 P protein targeting to lysosome
GO:0006726 P eye pigment biosynthetic process
GO:0006727 P ommochrome biosynthetic process
GO:0007601 P visual perception
GO:0031084 C BLOC-2 complex
GO:0031409 F pigment binding
GO:0048072 P compound eye pigmentation
GO:0050896 P response to stimulus
GO:0060967 P negative regulation of gene silencing by RNA
Transcript
Level		FPKM:2.12 TPM:2.29
ORF EntryO_BomoOtmSK5443_complete:A_BomoOtmSK_comp10372_c0_seq1
Sequence
(Nucleotide)
GTATGAGTTCTTGCCTTAATAAATCTAAATAAATAAAAAAACATTTTGTAAATAAGAAAA
ATGATAGTATAAAAATGTCGAATATTATGCCTCCTCCTTATATATTGCTGGAACTTCCAA
ATGTTACAGAATGCATTAATTACCCAATCAAAAATGTACAACGTATAAAGTACACCTGCT
TTGATGTTTCAAAATCGCTGTTAGCATTTGGAGCTACGAGTGGTGGTATTTACATATTCA
ACAAGAATCCGTGTGAATTTGTGCAACTTATTCCAAATAAGGATGGCGCTATCACGCGTC
TGTCAATATCGGCTGACGAGAAGCACGTCGGCTTCGCGAATGGGCGCGGTGTTATCACGG
TCTCAGGATGCGAACAGGGACCCAACGCCCTGCATTCGGTAGTCACGTCCAAGGAGCACC
AGGGCAACGAGGTCACCGCGCTGGCCTGGAGCGGCAACATGCTGTTTAGCGGCGACGACG
TAGGCAAGATAGCGGTCCTGCAGCTGCAGAGTTTCATCGCGAAAACAATGTTCCAGAGTT
CGTCGCAAACGATCATGAATTTGGATTCTCGTGTATGTCAAATTGACGTAAAATCGTATA
TGCTATTGGTATCGACGTTGACCCGGTGTTATCTATGCGACACGACCGAAGAACAATACA
GGCAGATAGGCCAGAAACTAAGGGACGGCGAATTCGGTGCTTGTTTCGTCAACAAAGAGA
ATGCCGTCGAGATTAACATTAAGAACAAAGTTAAGGATTATTCGGAAGTCAGGAAATACA
GTATTATCAACGAGGACAGCAGCTTCGCCGTTGGTAGGGGACTGGATAACACATTGGTCT
TCGCCGCCAGACCCTCGTCTCGGTTGTGGGAAGCCGCCGTCGATGGGACAGTCAAAAGGA
CGCACCAGTTCAAACAGATTTTAGGAAGGAGTCCCGTGAATATTCTCACAGTAGACGCTT
ATGAACACGAAAGACATAGTTTCGAAGAAATGGCCACGATTAACGCTGACGGCCTATCGG
TCAACTTTCCGAGGATCTACAATCTCAATGGCGTCATATTTTCGTACAAGAAAGACGCTC
TTTTCTTTCTCAACTTGGATAATGTTGACCACACGATTTGGTGCGCTCGTTACAAAAGCA
TAGCCGACTGTAAGGTCTACGGTGATGCGATATACGTTTGGCTAAATAACGGATCGTTAA
TCAATTTGAAGTTCATGAAAATAGACAAATTCCTGATCAAATGTTACGTCGATGACAAGC
ATCGTTTATGTGCGAATTTGTGTGCTCAATACAAAGATTATTTACTGGCCAACGAGATGT
CAACGAGGCTGCACATCCTCGCCGGGCTGAAAGAGAAAATTGACGATAAAGAACTGCTGG
AAACTATCCATACTCTGTTAGTGAAGTTCGAAAGATTGAAAGAGAACGAAGCCAAGAAAG
TGAAATCTGGGATATACGTGGTCGACAATACGTATAACGCACAAACTTCATTGATGAGTG
AAATGGATAAAACAATCGACAATAACGAAGAATATAGTTTCGGTAACATACCACCGGAGG
CCATGCAGACGCTGAAAGACTTCAGTGTGTCGGTCACGGACAGATTGAATACGAGTAAAA
AGATTTTAAAAGAGAAATGGGACGACTTCGAAGGGAAAATGAAGCACCTCAGTGTCGAGA
AACCGCAAGAGAAACTAATTATGCCCCCCGCCCAAACTCCCAAAATAATATCAAGAGATG
AACCTTTAGCTCTTGATCAAACGCCTGTATTGGAACGCGATATAGTCTTCAAACAACCTA
GTCAAAAAGCCATAGAAATAGAAAATAATATTAGCTCAGACAAAGACGATATCTGTAAAT
CTCTCTATCAATATTTTAGGTTAAGCCTCGTCG
(1893 bp)

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