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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp10352_c0_seq1
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		polycomb_protein_suz12-B_isoform_X2_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000979 F RNA polymerase II core promoter sequence-specific DNA binding
GO:0001739 C sex chromatin
GO:0003682 F chromatin binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008284 P positive regulation of cell population proliferation
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016574 P histone ubiquitination
GO:0031490 F chromatin DNA binding
GO:0032993 C protein-DNA complex
GO:0035064 F methylated histone binding
GO:0035098 C ESC/E(Z) complex
GO:0042054 F histone methyltransferase activity
GO:0043565 F sequence-specific DNA binding
GO:0045596 P negative regulation of cell differentiation
GO:0046872 F metal ion binding
Transcript
Level		FPKM:2.71 TPM:2.92
ORF EntryO_BomoOtmSK5414_internal:A_BomoOtmSK_comp10352_c0_seq1
Sequence
(Nucleotide)
TGTCAACGAACTAATGAACTTGGCGGTTTCACTAACAATTTAGATAAAAAAGCTCAAAAA
ATGCCTCCCAAGAAGCGAGATAAAGACGGTGAATCGAATAAAAACTCTAAAATAGATCAT
TTGCAGGCCGATCATGAGCTATTCTTACAGGCATTTGAAAAGCCAACACAAATATACAGG
TTTCTAAGAACACGAAATATGTTATCGCCAATATTCCTAAACAGAACTTTATCGTATATG
AAAAGAAGGATGTCAAGAAGTAATAAGAGTAGAACAGGCTTTAAAGTTGACTCTTTGTTG
GAAAAGATAACATTAAAAAAAAGTACTGAACTTCAGCCCAATAGCTTAGGGGGATACATG
ACTCTAACATTCTTAGGATTCTACGATAAGAGCCTCATTGATCCTAGAGACTATCAAGTG
AAAGTGGAAACCCTTCTCTTAAAAATATGTCATAAAAAACGGAAAGAAAGTTCGTCTGCT
ATAGTTGAAGTTTCAGTTGGCAGTTGTTCGGTTCCACTAAACCCCTCAACATCTGAACCT
CCTGCGATGGCTTCAGCAGTAAGCATATCAAGTGACACATTCAGTCCATCACAGGGTCCT
AATGTAAAATCTTATATGCTTATGTTAAGAGTAACGGTCACAAAAGCGAATGCTGCGAAT
ACTTCTAATGGTACTTCTAACACTGAGATCACAAATGGAGATTGCGAAGAGCCAGTGACA
AAGCGTCTGAAGTCTACAACGGAGAATACTGATAGTAAATGGAGCAAGCTTTATGGTAGT
GAATTGATAGTATATGACAAGCATAATAGATGTTTGTTGACTAATGGAGAGTATGATCTT
GTATTACATGACACACCACCTACAAGAACTAATACCCTCGCTCGATCACCGCACAAAGCA
CTGATGGCACAATGGGAAACTATACCTAATGAAAATGATATACACGCAGAATCTAATCCA
TTTGACATATTCAAAGTGAGACCATTATTAAAATTAAAATTGAGCTGGAGTCAAGAACCC
ACAAATGGGCTGGTGAACAGGCCTAAATTGTACCAACAATCTGGTGAAAATGGACTAAAA
AAAGAATCTAATTCTAGCAAAGAAAAATCATCACATAAAACTAATTCTAATGATGTCAAA
AATGGTGAAAAATTGAAATTTGAGCCGAATGAAACTGACTCTAAAAGACAGCAGATAATC
TACCAGTTCCTATATAACAACAATTCGAGACAGCAAACTGAAGCATGTGATGACTTGCAC
TGTCCATGGTGTTCTTTGGACTGTGGGACTTTGTATTCACTGCTGAAACACCTTAAATTG
TGTCACTCTAGGTTCAATTTTACATATTTTCCGATCCCTGGCGGAGCGCGTATCGACGTA
TCGATCAACGAGCTGTACGACGGCTCGTACACGGGCTCCCCGCACG
(1426 bp)

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