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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp10316_c0_seq1
Scaffold_idBomo_Chr23
NCBI non-redundant
(nr)		histone_deacetylase_complex_subunit_SAP18_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000398 P mRNA splicing, via spliceosome
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006342 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0008134 F transcription factor binding
GO:0016580 C Sin3 complex
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:24.99 TPM:26.95
ORF EntryO_BomoOtmSK5377_complete:A_BomoOtmSK_comp10316_c0_seq1
Sequence
(Nucleotide)
AAAAAAAGTCATTTATCATCAGAAATTGTAATGTAGGTAATTGATAGGTATTTATAGACT
CGCATAACGTAAATAATTACTTAAGTTGGAAAAATTAGTAGGACCACAATTGTCCAAATA
TTATGAAAATGGCGGGCTTAGAATCAATGGTAGTTGAAGAAATTAAACCGACAGAAAAAC
CGGTGGACAGAGAAAAGACCTGTCCTCTATTGCTCCGTGTGTTTTGTTCAACTGGCCGAC
ATAATTCTCCTGGAGACTATGTTAGAGGAAACGTACCTCAGAATGAATTACAAATATATA
CATGGATGGATGCTACACTGCGAGAACTTACAGGACTTGTAAAAGAAGTTAATCCTGAGA
CGAGACGGAAAGGCACATACTTTGATTTTGCCATTGTGTATCCTGATATGCGTTCGCCTA
CATATCGTATGAGGGAAATAGGAGTTACATGTTCAGGACAGAGAGGAGGCGATGATAACA
AGACACTTTCACAACTGAAATTTCAAATTGGGAACTATCTAGACATCTCAATAACACCCC
CAAACAGAATGCCACCACCAATGAGGCGTCCACAACCATATATTAATAATCGTCAGTACT
GATAATTAATTTTAATAAAGAATGTGTATCAACTGTGTTCTTTCACTTGATTAAAAGGGT
GAAGTTGGATTTCATTAAATTACTATTATAAAGGGGAACGCCCACTCTCCATAGTGTTCT
GGGCCCAAGATGGACATCAAATAT
(744 bp)

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