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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp103154_c0_seq1
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_SMURF2_isoform_X2_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0045121 C membrane raft
Transcript
Level		FPKM:4.38 TPM:4.72
ORF EntryO_BomoOtmSK31369_5prime_partial:A_BomoOtmSK_comp103154_c0_seq1
Sequence
(Nucleotide)
TGCGGCACTGCGCGGCGGCGGCGGGCCCGCTGCCCCCCGGCTGGGAGATGCGACACGCGC
CCTCAGGACGACCCTACTTCGTGGACCACAACAACCGCACCACGCAGTTCACTGACCCCC
GGCTCGCGCTCTCCGCTAGGCTTACGAACGAACCTGCTCCAACGAGTACTGCGTCTTCGG
TGGCATCACCAGCGACGGTTTCGCTCTCGTCGTCCGCCACAGCCCCGGGCGCCGCGCCGG
AGCCCCCGGACACTGACGCGCTACCTAAATACAAACGGGACCTTGCTGCTAAAGCGCGAG
TACTGCGTGCTGAACTGCAAGCATTACAACCCCAGACTGGACATTGCAGAATAGAGGTAT
CTCGAAACGAAATATTAGAAGAATCATATCGACTCGTAATGAAACTTAGAGGTAAAGAAC
TTCGAAAGCGGCTGCTGGTCAAGTTCCGTGGTGAAGAAGGACTCGACTACGGCGGGGTGG
CAAGAGAGTGGCTTCATCTCTTGGGAAGAGAGCTGTTCAATCCTCATTATGGACTATTTC
AATATGCAAATGCTGGTGAAGATAGATATGCACTACAAATCAATTCTGATTCAGGAGTAA
ATCCGGAACACTTATCGTACTTCCACTTTGCGGGCCGCATCCTGGGCGTGGCGTTGTTCC
ACGGACATCAATTAGACGCGGCCTTCACAGCTCCTTTCTACAAGCAACTCCTAGGGCGAC
CTATAACTCTGCGAGATATCAAAGATGTTGATCCTGAATTGCATCGATCGTTATCATGGA
TGCTTGACAATAGTATTCAAGGCGTGATTGACACGACATTTTCTGTGGAATGTTCTTCGT
TCGGCGCCGTCCGCAGCGTAGAGCTGCGCCCGGGCGGCGCCACCGAGCCCGTGACGGACG
GGAACAAGCGCGAGTACGTGCGACTATACGTGGCGCACAGGTTCACTCGAGGCGCCGAGC
GGCAGTGGCTGGCGCTGCAGCGCGGGCTGGCG
(992 bp)

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