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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp10293_c0_seq2
Scaffold_idBomo_Chr23
NCBI non-redundant
(nr)		toll-like_receptor_6_[Bombyx_mori]
Ontology
GO:0000281 P mitotic cytokinesis
GO:0002229 P defense response to oomycetes
GO:0002376 P immune system process
GO:0004888 F transmembrane signaling receptor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005769 C early endosome
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006952 P defense response
GO:0006955 P immune response
GO:0006963 P positive regulation of antibacterial peptide biosynthetic process
GO:0006967 P positive regulation of antifungal peptide biosynthetic process
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0007352 P zygotic specification of dorsal/ventral axis
GO:0007416 P synapse assembly
GO:0007507 P heart development
GO:0008063 P Toll signaling pathway
GO:0009617 P response to bacterium
GO:0009620 P response to fungus
GO:0009880 P embryonic pattern specification
GO:0009897 C external side of plasma membrane
GO:0009950 P dorsal/ventral axis specification
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016201 P synaptic target inhibition
GO:0019730 P antimicrobial humoral response
GO:0019732 P antifungal humoral response
GO:0019955 F cytokine binding
GO:0030097 P hemopoiesis
GO:0032154 C cleavage furrow
GO:0035007 P regulation of melanization defense response
GO:0035172 P hemocyte proliferation
GO:0042802 F identical protein binding
GO:0043234 C protein-containing complex
GO:0045087 P innate immune response
GO:0045610 P regulation of hemocyte differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0050830 P defense response to Gram-positive bacterium
GO:0050832 P defense response to fungus
GO:0070976 F TIR domain binding
GO:1902875 P regulation of embryonic pattern specification
Transcript
Level		FPKM:2.87 TPM:3.09
ORF EntryO_BomoOtmSK5351_complete:A_BomoOtmSK_comp10293_c0_seq2
Sequence
(Nucleotide)
GCGGCGTTCTTAATTACAAACTTCCCACTTTTCAATTCCTAGCTAATGACTAGTTATACT
ATACACAAAAATATTTACAATGTTTATCTAGAATATATTTGGTAACAACGAGATATACAC
TATAGCAAAATACTATTAAATACAATATCTTCTACTGGCAATACAAACACGACATCATAT
CAGTCTTAATTACAACAACATGAATACATAAATACAGTTGCTTAGAAGTATAAAAGTGCT
TCGTATATTATTATAATGCATTATATTCCTTGGCAAGTAAATATATATTGTTGCAGTATT
ACAGTCTCTTAAAATCATCATTAATTTATGTCATCGTCTAACAAGGAACAAAGTCATTAA
AATTAGCACGATTATCTAAAATGCTTTTGTAAGCTTATCACCTTTTAAGTTTGAATAAGG
CCAAACCCAAAAAAGCAGTTTAGCTTACACACGTGCTTGGAATGTGCGGTTCCATTATGT
TATATCTTTTCAAGATTAGAGGTGTTTAAAACCATCTTATCATCTGTGCAAGACTGAATG
AGTTTGTGGCAGGCAATCGTGAACAGACGATCGTGGTTGTAAGTAACCCTGTTCATCTAA
TATCGAGGGAGAGTGATGGTCGGGATGTTTGCGTAATGTATTAGGAGGCCTAGGTCGACC
GCCGTATGGTTGTTCGTAATTTTGAGTATCAATAGATATGTAGCTGTGATGCAAATTCTC
TCCATCTTGAACTTGACTCGTTAAAGTTGTATTTGTCAACATAGAAGTGTCATCTTCAAT
ATTAATACCTACGTTAGCAGTTGTAGGAGTTTGAGGTGGAATTGCATCATACTTATACCA
ATGTTCTGGCGCAGTAGGTGAAGCGGTATATCTAGAAGGATGCCTTCTTGCGTTTGGACA
AATACCATGATTGTAATTCATTGTATCTTTGTTCCAATGTAAATTAGAAATATCTGGCAT
AACGAATCTAATTTTTTCCCAAAACTTCTTTTCGCCCCATAATAAGACGTTGCATGTTTT
TAAGTAGCTTTGAAAATCTACATCTAAATTTAATGCGCTAACGTCTGTAGTCAAAATAAA
TATAACTCTATGCCGTCTGATAGACGGGTGAATGGTAGTAATTACATGTTTGATTGCCGC
TTTAAAAGTTGCTTTACACCATTCGTTTTGTAGAAAATTGAATGAAACAAACACTAAAAT
TCTTTTAGACGATTCAGCAGCATTTGTTATTTGCTCACATAAATAATTATCCGGGCCATG
TTGCAAGTCTCTGTAATGAAAACACATTGTATAGCCAGAGTGTTCCATTTCTGGTGCAAC
CACTTTCGATACAAAATCATCATCTAATAAACTATATACAGCATACCCATCATATAACCT
ATCCCTATCGAGTTCGCTTTCTTGTATGGATGCACTTTTAAACAGTCGTACTCCATATTT
AGAATGGGCCCATAGTCGTACATTTTGTCTGAAGGAAAATGCTAAAGCACCGAATAATAA
AATGAGAATCACACTTATTAAAACGACAGCTAAAAGTGGTACAAAGTTCAGTTTAATCGT
GCTTACTTCATCGTACTGATATGGCTGGTTCTCAGTGGGAACGGTATTGTCCATTACATT
CGAGCCATGGCATTTGTCGATCGCATCAAATACAGTTAGATTGGAAATCAACTGATTTTC
ATCGACACAAAACACTTCTAGTGGATCTTCGTGAATTTTCTTTAACCAATTTTGTAAAGA
AGCAATGTTATCACACGTGCATGTGAATACATTACCACGAACATTAACGTTGTCCAAGTG
CATGACGTGACTCAACTTTTTGTCTAAGTCAAAAATTTTATTTTCTTGTAAATAAACAGT
CCTTAAGGATGACAACACTTCAAATGTTTTGTTAGGAACACTTTTTAATAGGTTATCGTT
TAAATATAACTCTCTTAAGTGCTTTATTTGTGAAAATTCACCACCAGACAATTCTACCAG
ATGATTGTTTTCTAAGTGGAGAATATTTAAAGAATGAAGGCCATTTAAAGTGTCATTATC
AATACTGGCGATATTACTGTTGTTTAAATATAATTTATGTAATTTCTTTTTGCCTATAAA
AAGATGACTTCCGAGAGCCCCGAAGTCATTACCATCCAAATACAGTTCAGTAGCGTCCAT
TGGTATTTTTTCTGGAATTTCTGTATAGCCCACATTTGAACAATCAATAACGTTCGAATT
CCAGTTACTATCGTGAAAGCAAGAACAGCCCTCAGGACAAGTCATTTTGCAATCACAGGC
TTCAAATTCACAACAAAAACAATTTGAGGAACAATGAGTTTCATATGAGCAAAGAAATTG
AGTTTCTGGTACGTCCATCAAATTCGCTCTCCCGCCATATTTATTATTAACAACTTCACA
CATCACCGATTCTAAATCCATGAACCTAGGGTATTGCCGCATATGATTCCAAAGATTAAT
CTTTTGCAGCCAAATCATGTGACAATTGCATACAAACGGATTATTTGCAATGAAAAAAAT
TGGCAACGTTTTATGCTTTGGTATATGAGGCAAAGTAAACGCTGATAGTTCGACAGTTCG
CAATTTATTATCTGTTACGACGACTTTTTCTAAATCCCGTTTTTGTAAAAACGTACCTGG
ATGTATCGTGTGAATTTTGTTATTATTTAAGAAAAGGTTCTCAATAGAATCAGGTATCGA
CAGTGCATCGACATTTTCTAAAGCGTTGAAACTCGCGTCGAGCATTCTAATATTGCGTTG
AACGTTTTTTTCATTTTCTAATTTCGTAATGTTATTGCTATGTAAATCTAGCCATTCTAA
ATTATCTGGAATATAACTGTAATCAAAATAAATAAGTCTATTTTCGGATATGTTAAGCCA
GCCGAGAGTACTTAGCTTATTAAAAACGCCTCGAATATCAGTTAAGCTATTACCGTCTAA
CCGAATCGCTTTTAATGTAGGATTTGAAACAAAAGCGTCTTGCTCAATAGTTTCAATTTT
ATTTGAAGCTAAATTTAAAAGTTGTAAAGAAGGCAATGTGCTAAACGTGTCTTTAGGAAT
ACTAGATATGTAATTATCAACAAGTCTTAGTCCGTATAATTCTTCCAATCCTTCAAATGA
TGTGTTCGTTACCTTTGTGATGTTGTTTTTACCAATGTCTAATGATTTCAAAAACCTTAA
TCTTTTAATGCCATCAGGAATCACGCTTAAACTATTTCCGTTCAAACCCAAGTCTTGAAG
ATAAGTTATGTTTTCAAAAGAACGTTCATGAATAGAAGAAATCTGATTATTATCGAGATA
TAGCTGACTCAATACAAACAAATTTGAAAAAACATACTCATTCAAAGATTTGAGCTTGTT
ATCAGATATTGAAAGTTGATGTAGATTTCTTAGTTCAGCGAAAGCACCGTTGCTGATAGT
TTCTATTGCATTGTTATCCAAGTTTAGTACTTGTAAATTGTTCAAATCATGAAAAGATTT
CGGATCGATTCGTGCAAGCAAGTTATACGAAAGATTTAAAATGACTAAGCGAATAAGGCC
AGCAAAAGTGTCTCTGTTGACCCAATCATTTGTAAGACGATTTCTTGATAAATCTAATTT
TTCCAGTTGATCCAGTCCTTCAAGTAATCCTGGCGCCAAAACGGATAGCGAATTATTTCC
TAATGAGATTTCTCTAATAACTCGCGATGATTGAAATAGTTCTGGAGGTACTGCAACTAA
CTTATTCCCCGACAAGTTGAGAATTTTTAATGAGTTCAATCCAACAAAGGCTCTGTCACA
GATTTCATTGATTAAGTTATTCTGGATATTCAAAACCTCCAACGATCTAAGACTTGAGAG
ACCATTATCGGGAAGTCTCAAAATATTGTTGCGAGACAAATCCAGTGTTTTCAAACCGGT
GTTGCATGATTTACCCGGTGCTATGGGTCCTTTACCCCAGTCCGAAAAGCCAATTTCGGA
AATGTCTTGTATTCTATTATTAGTCAGGTTCAAAACTTCTAAGCTGAACAGTGGGCAAAA
TACTTCCGAAGGCAGCATATAAATATTGTTGTCCCCAAGGTCGAGCGTTCGGAGTTCCAT
CAATCCTCGAAAACTTTCGGCGTGAAATTCCATGGTCATCGCGGGCCAATCATTGTTGAA
AGAGCGTAAAGTTAAGCTCGTTAAATCACGAAGTGGCGATAGTACTGTTGCGGGGACGTA
ACGAATTTTACAATATTCAATATGCAAGTCTTCAAGTTTTCGCAGTTGTCCCAAAAAACT
GCCGGTATTCATATGCAAAGAGCTTTCGAAGAAAAGTAAATCGGTACACGTAAGCTTTAA
TTTATTTACATTGTACGCCTGTGCTGTCGTTATGTTTTTAAATAAAAAATCCACTGAGCC
GATGGTTTTGATATTACACGTGAGAAAGTTTGATTCACTCAACTTTGGGTCCGAATAGTC
CCACTGGCAGCCGGTGGGGGCGGGCGGCGCGGTATGTGCGCGCGCAGTCGCCACCACAAC
GAAACATATCCAAACTTTTAACGGATCCATTCCACGAAAGTTTATAATCATATTTTCACA
ATAATACAGTACATTTAGTCACTTATTTAACACAGTGCTGAACTTCAAAAAACTTTTTAA
CAGTTCACAGCTTATTTTCAGTCTATGTTTATGAATGAATACGAGGCGCTCTACAACGTA
TGTAAACAGAGAATTTGAGATCGCGCTAAAACTTTGAACGCAGCCATGCTCCCTT
(4735 bp)

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