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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp10257_c0_seq1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		autophagy_related_protein_Atg3-like_protein_[Bombyx_mori]
Ontology
GO:0000045 P autophagosome assembly
GO:0000153 C cytoplasmic ubiquitin ligase complex
GO:0000422 P autophagy of mitochondrion
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006914 P autophagy
GO:0015031 P protein transport
GO:0016874 F ligase activity
GO:0019776 F Atg8 ligase activity
GO:0019777 F Atg12 transferase activity
GO:0043653 P mitochondrial fragmentation involved in apoptotic process
GO:0044804 P autophagy of nucleus
Transcript
Level		FPKM:9.39 TPM:10.13
ORF EntryO_BomoOtmSK5305_complete:A_BomoOtmSK_comp10257_c0_seq1
Sequence
(Nucleotide)
ATGTACTTCAAACTTAAAATGATATGCGATCACACTACGAGTTTATAGAACATACATGCG
CAATATACAATATCATGGTAATTCCAAACATAACACAAAAAGATACAAAAGAAAAACGAA
CTTTTAATATGGTTTTTGAATTTAAAAATAAATAGTTCAACACAGATCCGGTGTAACTTG
CACATACAGTGATAAATTCGGACGTCGCAGCCTGTCTAATAACTTGCGAAGTCGTCTAAA
TGGCGAATCACTTGATTTTGATGGGTGAAAGACAACCCATAAAATCTTTAAGTTAAGAAT
TGAGTTATAGACCAGAAAGTTTGTTGAGAGACAGAAAAATGCCTTATTGCTGAGTTTCTA
ATAATTTAGCAACAGACAAATACCCTATTTACCAAAAAAAAGGACAATGCAAATTAACAC
CGCACAGTTTCAGAATATGGCGAATTATAAAAAAAAACAGTAATAAAATAAATTAAACAA
AAAAATTACAATTTTAGTATTTACCTACTTAACGTTTATAGAATATAACAGAATCCTATT
TATTTTACAGTTTTATTACACATTCATAATAACAAAATGTTTAAAACACATTTTTAAATC
ATATTACCTACATAAAAATAGTTTATAAGTGCATTAGGTAATAAATGCAATCATAAAGCT
GCAATGTATTACTGGCCTTTAAATGTGCACTTAATGTTAAAAAAATAACGCGCTGCCAAA
ATTGTTGTCAGCAACAGCGATATGAGAATGAATTTTTAAAATATAATGCGATTCGTTATA
CAAAAGACAAGATTGCAAACGATTAAAAAACGAATTATTGAACTTGTCGATTTTAAAGAA
AGAACAAAAATAAGACATGTATTATGAATGAGCTGTAGAGGGTATTTACATATTTACTTA
TACATACAAATTTCATAACAGATCGATAGAAACACGTAGTATAAAGAAAATGAATGTTTT
CCTCGGCCAATTCTTTTCATTCTTTTAATTCAATTTAGATACTGTTTAATTTGCTGGTAA
CATTTAAAAGAAACAATAAAACGATTTTTAGAGAATGATTGATTGTGTTTTTGAACAGAG
TAACACATTGGACGAGAGAAATATTTATTTACTAATGCTATCCAACCTTATAACAAAATA
AATCAGTAAAGTGTTGTATATTTACAAAACATTACAGCATGATAAGCCAAATATATCATT
TTGTGTTTAAAAACTTTAGGTGTTCATATTAAAACTAAAAGTCTTACTTAGCGTCTTCAA
ACATTTAACACTATCGGGACCACAGACAATTGTGCTCTACAAGCTATCTTTGTACCGTAA
AAAGCTGAACCATAAACAATATGCTTAAAGTTAATTAATCGAGAAATTCTGTGTGAAATC
ATATTCGATGGTGGGTATAACTGTTTGTACGAACTTCAGGAATACTATGAGGTAGGAGTG
GACGCCCATCTCGCCGCCGCTCTCCGTTACCGTCTCTATTATCTTCTTCATGACGTCCGC
GTGCCTGCAAGGGTGTACGGACGCCATGCTGGGTCCAGAGAGATGAGGGTGAGATTCCAT
CGTGACAGTCTTTTTAGCATGATCTTGGGACACGTCTTCGTACATCTGCTCCACAGTCAG
TAGTGACCGGTTCTCATCATATCCGATGAGCCACAGCCTCGGAGTTTGGTAATACTTGTC
ATAAGTGATGTGTAGGTCGTAAGTTCGAGTCCGGACGATCTCATCACCTTCTCCTTGCTT
CTGTTTCTTATCAGCTTTGAGTTTTAGCTCCGTACGCTGGGCTAGATCTGTTGATGGATC
TACTTCATCTAAAAGACCAGATTCTTGGAACTGCTCCATGTCCTCGGCCTCGCCCTCATC
ATCTTCGTCTTCATCATCATCACCACCGTCGGCAGCTCCATCGTCACTGTCGCCAGTGTC
AGCTGCTTCGAGGGTCATCTCACAGACCTTTTCCTCGAGTGCAGGGGAGCCTGCATTGTC
ATAGTGATGAGTATCAACCCAGCCACCATCTGCATCATTTTCATCTTCTATCACTTTCTC
TTTATCTTCACAGTATTCAATTTGTTTACATCGTCTGTAGCATGGCACGTTTCGAGTTAT
AAGGAATTGTTTGTCTGCAGGAAGGTAAGGCCTAATCTTAGCTTCCTCTCCCTTTGCCCA
CTGCCAGGTAGGGCAGTGGTGCACCAGGTGGTCACCAGCAGCCACAAACTCTTCAGGAGT
CAGTACACCAGTTTCTTGAAATTTCGATTCCTTCAACACCGGTGTCAAGTAACCGGCCAC
GCCAAGAGCAGTTCCCTTTACTGTGTTTATTACACTTTGCATTGTGATGTCCCTAATAGG
ATTATGGGTTGTTAAAAAAACTATGAGCTGTCTTTTACACTATCTACTACGTATACCTAG
CAATTGCCGGCCCACAAAAGAACTTATCAATTTGACAATTCAATTTGATTTGATTTAATT
CTTTGTTCAAGTGTTTTCTCGTTCGGTGGTTACC
(2494 bp)

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