SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp10163_c0_seq2
Scaffold_idBomo_Chr2
NCBI non-redundant
(nr)		uncharacterized_protein_LOC101738867_[Bombyx_mori]
Ontology
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005882 C intermediate filament
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0030056 C hemidesmosome
GO:0031012 C extracellular matrix
GO:0098733 C hemidesmosome associated protein complex
Transcript
Level		FPKM:6.08 TPM:6.55
ORF EntryO_BomoOtmSK5189_complete:A_BomoOtmSK_comp10163_c0_seq2
Sequence
(Nucleotide)
CGAGCATCGGTTCGCGCGGATGTTTAAACAAAACAGCGGAATAATCAGGGGAAATTCAAT
AAAAGTTTTTTTGTAAAAGTGTTAATTTTAAATTATTCGTGAAGTAAAAGTTATTTATCG
TGTTAGCCGCGAGTGTTTTTAAGTTTCTCGCCTGCGATTCTAACGAGTCGCGTGTGCGTA
GTCAAGTCATCGAGTAAATGTGAAAGTTACTTTTGTGAGAAAAAGTGAGAATATATATTT
CTTAAATTTAGTGTTGACTTAAAATTATCTTACCCTGTGAATTATCAATAAGCAACTCCT
GAAGAGTGAATTAGTGAAAGGTACAATAAGTTGGATTCGAGCCACATTCAAAGGACACAG
CCACCAAATGTGGAGAATACAAACAAATAAATAATAATAATAACAATCGAGTTGTGTTGA
ATAATGTGAGAGTGCGGGACGGATGTGCAGTGCGTCGCATAGAACACCGCCTACACAAGA
TGGCCGCCGCGAACACAAAATGGCGGACGAGAGAATACAACGCGGTGCTGCTCCTTATAT
TCATCCAGGCTGTTAACGGCTACGAGGAGTCGTACACAGTATCACAGCTGTCACCAAAGT
CAGAAGCCGCGGAGAACGTGCCGCGGGGCGCGCTGCTGCAGACGAGTCAACTCGAGCGCG
TGCCCTTCACGATAGAACCCAGCCGGTATGAAGAGTACGAGGCCGCGTCTGATCCACACG
TCGTCGACGGTGAACGAGATGACCACATTATCGTGGCCCGCTCCGCCGACCCCGTCGGCA
GGGAATCGAGGTCTATCAATGTAGATAGCATTCCCTCCTCCAACAATGAAATAGACAACG
AATTAGAAATACACAACAAAAGAAAATATTATGATATACATCCGACCAAGACTGTAGACT
ATTACTACAGCGATGATGACGTAATCTTGTCTTCCGAGGGCTTCGGGGACAGACTAGAGT
TCAAGTTTCCGGGGGAAGGGCAGCGGGTCCCCAAGGCGCGTGCACTGGCGCCCTCGGGAC
CCAGGATCCGGCCCACTGCAGTGCAACCGATCCTCGCGACCATCAGCCCTAAGGACGAGG
CGAGGCAGAACACGGAGATCCAGAACATAATTACCGGTATAGTCAAACTCCTGAACGGGA
ACGTGAACGTCCAGGCCAATTCTCAACTGCTGAACGGGCGTCCCGGTAGACCTATGGCGT
CGAGGATTAACAACCGTGGCCCGCCGCGCATCTCGGACCTGCCCCCGGACTTTGACAAGT
TGATGATCACGCCTCCCCCGCATCCGTTTGCACCCACTAAGATTCCGCCTCCATACCCTT
TCGACCGGCCTCACCATGGGGTCAATTTACCCGATCAAATTGTGCCTCCAATGAATCGCC
CCGGGATCCGCCGCCCCATGCCGCCGTGGCAGAGACCACGTCCTCGTCCGCCCAACAGAA
AACCAAACCCGAACCTCCCGGCATACAAACCAGTGCAAATACCACAGGACCTCATCGGTG
AACTGTCTCAAGAAGATCTCACTACACCAGATAACGATACGACACTACAGAACAATATCA
GCCAAGATGAGATCACGTTCACTCTTCCTGATCTTAATACAACCGAGAGTTATAAAGAGG
AGACGAAACCAGATGCTCCCGAAACTACTAGCAGCACGAGCACCACGACCACTTCGACAA
CGACAACGACAGAATCTTCCACGACGACTAGCACGACAACGACCACAGAGAAGCCGACCA
CTACAGAGCAGATCACCACCACAGAACAACCTACCACCACCACGGAGAAAGCAACTACAG
AGAGAACGACAACAACTGAAAAAGCTACCACGACTTCGGAGGTGCCTAAAACAGAGAAAC
CGATAAAACAAGAGAAAGATAAAAAAAAGGAAATCACTGTGATCGAAAAAGACAAAAAAC
ATAAAATCGATGAGAAGATAGGAAACAAAACGAGTAAGAACGAGACGGCATTCGATCAAA
TAGTACAGTCTTCGGTGCCCTTTGTGACTAGTTCCTCGGTGATAGCTCCGACGCCCACCG
AGGGCCTGCCCTCGCACGCGCCCGCCGTGCCGGTCTCCAGCGCCAGTATAGAGAGCTCAT
CCATCAATTCTCAGCCGATACCTCCTTCCCGAGATATACATTACCACCCGTACCGTCCTC
GGCCGGGCATAGTCCTGGACGACCCGGAGTTCAAGCCGCACGGGCGACCTCACCGCCAGG
ACGCGCCCGTGGTCACGGCGCACGACACTCGCCTGCCCGGCTACGGGGAGATCTTCGACG
TGACCGTCTCTGCAGTACAGGGACCGGGGGAGAAGGGAGGCTCCGTCCACATAGAGACGG
TAAACCTGTCACCGCACGGCGAACAAGACATCATAGTGTCGGCTTCCGGCTCGCAAGGGT
TCGTGTCCATCGACGGGAAGAGGACCTACCTCAACCTCTTCGACAGCTCTACCCCGGACG
CGCACTTGGCGCCCACCAGGGTACACACGCTGCCGATGTCTGCCCCGCCGCACGCGCCGC
GCCAGCCGCCGCCCGGACCTGACACAACAAAGGTAGAACATGCTCAACACGACCAACACT
CTCCAACACTGGGCACGGGAGTGGCCATACCCACAGATGACGTACCACCTCCTGTGAGAA
GACCGGTGATGCATAGACCTCAAGGATATAGGAGACCACAGCCCACTGTCAGGATCGACA
CGTGCATCGTGGGCGACGACTCGACCTGCGACCTCGCCCAGAACGAACGCTGCAGGACCG
AGGCAGGTATCTCTAGCTGCGGGTGCCGCGCTGGCTACGGGAGGCGCGTGCACCGCGACC
CCTGCCGGAGGGTCACGGCCCTGCTGCTCGCCGTCAGGATCGACAGGATGTACGACACCA
AGATAACGTGGGACCCGAAGCTGGCCGACAAGGACTCGGAGCTGTACCAGCAGCTCAGCT
ACGAGGCGCTCAGAGCCATCGACTCCGCCTTCTCGATGACTCCGTTCTCCGATGAGTTCG
TGAGCGGCTCCGTGAACTCGCTGCACACCGACGACGAGCGCGCGGTGTTCGTCAACTACA
CCATCCTGATGCAAGAGAGCCCGGAGTCTGTCCGTCCCGCGGTGGGGTCAGAGATACAGA
AGCAGCTGGTGGGCGTGCTGCGGAGACGGAACAACAACCTTGGAGCCTCCGCCCTCCACG
TGCGCTCCCTCGCGGGCAGCGTGCCGCCCCTGCACGATGTGGACGAGTGCTCGTCTCCGG
AGTTGAACGACTGCCACCAGCTCGCCACCTGTACTAACACCTGGGGCGGATTCAAATGTG
CGTGCCCAGAGACGACCCTGGACCCTGCAGGGGAGGGGCGCGAGTGTCGGCAGTGCGGCG
CCTCGCTGTGCTCCGACCGCGGGGAGTGCGCCTACCGACAAGGGCAGCCGACCTGCAGTT
GCCGGTCGGGGTACTACGGGTCGCGCTGCGAGGTGGACGGCGGCGTGGTGGGGGCGGCGC
TGGGGGCCTCGCTCGCCGCCGCGCTCGTCATCGCGCTCACACTCGCCGCGCTGCTCGCCT
GGAGCCGCAAGTGGTCCCGCGAGCAGAAGGCGGTGGGTTCCCCGGTGTTCAACTACATGA
CCGCCAACACAGTGAAGACGCCGCCGGTGGGACAGCCGCCGTACCAGGTGACGCTGGAGG
AGCGGCTGCGGTGGGCGCAGATCGCGGAGGCCATGGCTGCGCACTACGCCCCGGAGCCGC
AGAGCATGACGACGCGCCCCTCCTCCGCCATGTTCGGCGCCTACCCCACGCTGCCCCCCG
CGCTGCCCCCAGTGCCACTGCCCAGGATGGGAGTCCACGGCGTGAGCACGGTGACGTCAC
GGGCCAACACCGCCGCCTCGCACCACAACCTCTACGGGTACGGCGGGCCGCTGACGGTGG
ACTCGTCCGGCTCGGAGTCGTCCGGGCCGCTGCCGGACCGGACCGACCTGCTGATGCCGC
GCCCCAAGTCCCGCGCCAGGACCCTCCAAAGCCAGAACAACATCTACTACGACGTGGACT
ACGAGAACGCTCCGGAGCCGCTGTACGGCACCAAGGGCATCCCGCTCTCCACCTACAGCG
TCAGCAGGGGACCGCCCTTCTACAGGCCCTGACCAGGAGCACGCTTACATTCAGGCGAAC
AGTACGCTTGTTGACACAACACTATTTATTGTAAATTCATGATGATGAATATGGTGCTCG
TTGAAAATATTGAAATATGAATTTGTTAGAAAATAATTAGCTTACACGTTGCATGCTGGA
GCCCCAGCTTACTCCAGCGAGGTCTCTGAGGCCACCGCTGTGTGTCCTCGCTCCGGCGCT
GGACTGTCTGTGTCTGGAGACGACGCTCGGATTGAGCTCCATCTTATTATAATCTTAACC
TAACCACATCTACATGTATATACTTTCTGCGGGAAAGGGATAGAGTATCCCTCCTCATTT
TCAACCAAAAAAAAACCCTAGTCTGATCTACACAAGCACCTGAATAACTCCTTCAATGTG
ACTCCCCGCCCCCCGGCCCTGTCGAGCGCGGGGCCGCATCGCCCGGGTGGCCGCGTCATA
CCAGGACAACATCCGACCTTCTGGATGTGTTCTTCGACTGTTCATCCTGAGGACGGACAC
GGCACTGTCCCCCCGGGCTGGTGGCTGGGCCGACCCCGTGGTGATGCTATGTGTATATAT
AATGATTAGAATTAAATAATAGCACGGTGTTAGCGCTGAGGACGTTAGCTACTCAGTCCT
GCGGGGGCGGAGAGCTCCCGCCCCCTCAGGGACTATGTACCACAATGTAGTCTGTGCTGT
GTGTCCTGTGTGACGCGCACGACGGGCACGTGTGCTCATGAGCTCATGGCCCGTCGATGG
TTCATCGAGATCATCGGCTGCTCACGAATAATAATTAAATTATATAATTAAGAAGAGTCA
AGTGGGTATATGTACGCACGGCAGCTTTACACGAGACCATGGTCAGCGACACTCCATTAT
ATTGATTTACTGTGTGTATATTTTTGTTACTGATATATCAATTATCTTTGTAACTAATTT
TTTACTATTTTCAAATGATGTTGTTTATGGACAAAACTAAAGTTAATAAAATAATGTCGG
TTGACTAAGAGACGAGCCAACGCTACGGGGTCGTTGTGTCTCTGCCCGCGCCATACCGGC
ATGTGCATTTAGTAGTGCATAGTGCGCACGTGCACACGAACACACGTGCACACAAGCACT
TGTGTAATTACCTCAGGTCGGCGCATCGAGCGTTGCATTTTGTACTGAGTTTATATTGTT
ATATATATATAGTTATG
(5297 bp)

- SilkBase 1999-2023 -