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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp10151_c0_seq1
Scaffold_idBomo_Chr14
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_UBR2_[Danaus_plexippus_plexippus]
Ontology
GO:0000151 C ubiquitin ligase complex
GO:0000502 C proteasome complex
GO:0004842 F ubiquitin-protein transferase activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030163 P protein catabolic process
GO:0032007 P negative regulation of TOR signaling
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0070728 F leucine binding
GO:0071233 P cellular response to leucine
GO:0071596 P ubiquitin-dependent protein catabolic process via the N-end rule pathway
Transcript
Level		FPKM:6.42 TPM:6.92
ORF EntryO_BomoOtmSK5173_5prime_partial:A_BomoOtmSK_comp10151_c0_seq1
Sequence
(Nucleotide)
GCGCCGGCGTGTTCCTGCGCGTGCGCTCCTGCGAGCTGCTGCTGGTGGCCGCCCCCTCGC
GCGGCGCCAAGATGCCCGCACCCTATCTGGACACGTACGGGGAGACCGACCAGGGTCTGT
CCCGCGGCAACCCGCTGCATCTGTGCCACGAGCGGTACGAGGCGCTGAGGATCCTGTGGC
TCAGCCACGGGGTGCACGAGCGCATCGCCCGCGCCCTCGACACCAACATGCTCGTCATCA
CCACCTGGCAGAACTTCTGATTCACTCTGGAGCAGCTGCAGCAGGCCGTCAGGGACATCG
GCGTCGCGTGATGCCGACTGATCTACGTGACGGGAAGAACATATTCGACACTGTAACCCG
ACGCTATTTCAATATATTTTCCAAAAAACATTTAATATTTTAACGAAGATTGCTCGAAGT
CTAGTATAATTCCGTCGTGGAATAATGAATTAGAATAATATCTCCTTTCTGAAGATTAAG
CTTTTCAACGGTGTTACAAAACTATCATCTTATTCTGTTTGTGTGTCACGGAATGTGGCT
CATTTATGTTTTTATCTTGGCAATTAAAGAAACATGTGGTTTCAGAATTTTGTATTAAAA
TACAGTGTTGATATTCTTGGCAAAAAGTGTTTTGCGTCGTTTCTTATCTGCGTAATTTTT
TTCTTGTTAATAAAGTTGATAAATTAATGTCTTGAAAATTGTTTCAATTATATTGTAATG
TAAAATTGGTGTAATCGTGTTTTCTTCAACTAACAAATTTGTACAATATTCTAATAATCG
TTATATTTATTTATAATAATATAAATTTTGATTTATAAACAAGCTAAAAAACCTAAAACC
TATATACACCACATTGTTGTGTGAGATTCCATATAGAAATTTGCATTCAGAAAAGTTAAC
TAGTGGCTATTCGAAATAACAATCTAGATTAAATAATTGACATTCTAAATGTTGCGAGAA
ATGGCTGTGTTATACTCAATATTATTTCTCGTGTAGGGCGTAAGACTGAGCACACAACAG
ACAGACACTGTATCGGAAATAAAGTTATTTGGTTTAATTGATGTTCGAGCTGGTTGAGAG
TAAGCCCTTTACTGAACTCGTAGCTTTTGACATTGGATTCTCAAAAGTATTACTATTAGA
CATAGCTTAGTCTAGCTCAATCTAAAATAAGTGGTTGTACTTGACCATGAAATTAAAAAA
AATATTTAATATGTAATCTGTTGATCGATAAACACCCGGTCTTACGCAATAGCATTAGAT
TCGTTATCAAACGAGCTTAAATTAGGTTGTAGTTTGTGTTAGTGCAATTGATTAACAATG
TTCTTAATTTTAGTGTGCGTTGTTTTATCTAACATTTAATATAGAATGTAAAATAGAAGC
TAAATATAGAGGGTTTATTGTTGATGGATCTGCTGTAATAGAATATAAATAATAATGATT
ATAACTACATCATATACGTATATCTAAATCAAAAGTAATAACTTTTCATAAGTAATAGAA
AACTTTATATAGACTTTGAAAACCAATATTACGAAGAATAATAACCTAAATATAAATAAT
CTAATAATTCTGCCCTCTTGCGTTCTAATAGCCTATGAAGGCTTAATTTAGTTAGGTTGT
AAAATTTTAATTTTCGTCCTTTACGTGATGTTAAATAAACATCCAAGTTAATAGAAAACA
TAATAATATGTAGAAAAGAAATCTTATAAAATATGTATATCTCACAAATAAATTTTTGAA
GATGACGATTAATTCACTTACAAAACTTACCAAAACAAAGCATTAGTGTACATAGCGCTC
AGGTTTGCTTCTTGATTGATCAAACTTTTCTCGTACTATAATTTAAAATGCTTTGCCAAA
TACTATTAGCACATATAGGAATATTAGTCGTATGCGTTTTGAGTAAATGTAAATATTTAC
CACTTTTACCACCATATGTACCATTCACAAAAAATATTACTTTTTTTTTTATTAAATGTC
ATTATGAAAATGGATCGTTTCATAGTCATCTAATAATAAAATTATATGAATATTTTGATG
TCTGTGTACTAGTGTCCGGTGT
(2062 bp)

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