SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp10147_c0_seq1
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		chitinase_domain-containing_protein_1_[Bombyx_mori]
Ontology
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004568 F chitinase activity
GO:0005576 C extracellular region
GO:0005764 C lysosome
GO:0005975 P carbohydrate metabolic process
GO:0006032 P chitin catabolic process
GO:0006954 P inflammatory response
GO:0008061 F chitin binding
Transcript
Level		FPKM:10.55 TPM:11.38
ORF EntryO_BomoOtmSK5169_complete:A_BomoOtmSK_comp10147_c0_seq1
Sequence
(Nucleotide)
AATCAGGTCTTGGAATTAATTGAAAAATTGAATGGAAATAAGAAATGAAGAAGTGATAGT
TTGTAAAACTATGTAATTAAATAAACAAAAAGGAGTCGACGTCGCAGTTTGTGGAGAAAA
TCTTTCTATTTTAATGTTTAAACTCATATAGAACATCATTATCCAAGCTAAATCTGTTTC
ATCTAATAAAATGCAATGTTTTAAGACATCCATCCAAGTCATTTTGTTGCTAAACGTTTG
TTTTGCTACTTTATCGCCACCGTCTGACAAAAAGGGACAAAAAGGTGTAAAACCACAAGA
AGGGCCACGGAAGAGTAATGTTTTAGATCGTAAATTAGTTACGGAAGCTCCTTTAGTTAA
GGATATAATAAAATATCATGCGACCTACCACCAAGACGTTTATTCGCAAAATTTCGGAAA
CTCTGTCTTAGGTTATGTTACGCCGTGGAACAACAAAGGTTACGACATAGCGAAGATATG
GGCACCAAAATTCAACTACATCTCACCAGTATGGCTACAAATAAAAAGACAGTCACCAAA
TATCTACATCATAACTGGGCTCCATGATGTAGACCATGCTTGGATGAAATCTGTGAGACA
GAAGGGTGCAAGGAACAATATTAAAATTCTTCCAAGAATTATCTTTGAGAACTGGCAGGG
ATCAGATCTAAAAGCATTTTTTATGGAACCGACATCACTAACAGAACAGAAAGCTTTTAT
TGAGGAAATAAAAAAAGCTTGCAAGCAATGGAAATTTGATGGTGTTGTGCTTGAGATGCT
CTCTCAGATTGGAAAGTATGCTGACAAGTCTGTTAAGTTCATACAACAATTTGGTTTGGA
AATGACTGAAAATGGTTTGAGTTTGATTTTAGTCTATCCACCGTATAGAGGCTTCCCTAC
AGATGAATTCTATATACAGGCATTTAATGATATTTATCCTTATGTAGAAGCTGTTTCTGT
AATGACATATGATTTCTCTAATCCACAAAAGCCTGGTCCCAATGCCCCTTTGTACTGGAT
GAAGTTATGTCTAGAGAAACTCATTGATGGTGATGAAAATCCATCTAAAAAATCAAAAAT
ATTACTTGGTTTGAATTTTTATGGTAACTCCTATACTGTGAATGGTGGTGGGCCTATTGT
GGGTACTGAATACATAGAAATTCTCAAGAATGCCAAAAATAACCAAGTACTTACTTATAA
TAATAATACTGCAGAGAATTATATTGAAATCAGAAGTTTACAAGGTTCAAAAAAAATATT
TTACCCAACATTGTACTCTATACAAAAGAGGCTAGAACTTGCTGAGGAGTATGGAGTCGG
TGTTGCCATATGGGAAATTGGACAAGGGCTTGATTACTTCTACGATTTGTTTTGATTTGT
GATACAATTAGTTACATAATTAAAAATACATATTTAAA
(1418 bp)

- SilkBase 1999-2023 -