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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp10109_c0_seq1
Scaffold_idBomo_Chr2
NCBI non-redundant
(nr)		talin-1_[Bombyx_mori]
Ontology
GO:0001726 C ruffle
GO:0002576 P platelet degranulation
GO:0003779 F actin binding
GO:0005178 F integrin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005925 C focal adhesion
GO:0006928 P movement of cell or subcellular component
GO:0006936 P muscle contraction
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007043 P cell-cell junction assembly
GO:0007044 P cell-substrate junction assembly
GO:0007155 P cell adhesion
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016032 P viral process
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0030274 F LIM domain binding
GO:0030866 P cortical actin cytoskeleton organization
GO:0032403 F protein-containing complex binding
GO:0032587 C ruffle membrane
GO:0036498 P IRE1-mediated unfolded protein response
GO:0042995 C cell projection
GO:0051015 F actin filament binding
GO:0070062 C extracellular exosome
GO:0070527 P platelet aggregation
Transcript
Level		FPKM:12.45 TPM:13.42
ORF EntryO_BomoOtmSK5131_internal:A_BomoOtmSK_comp10109_c0_seq1
Sequence
(Nucleotide)
GACATGCTGCGCCACGCCAGGCAGCTGGGGCACGCCACGGCGCTGCTCATCACCAACATC
AAGACCGAGGCCGAGGAGTCACCGTCGGACTCCCAGCGCAAGCTCCTAGCGGCCGCCAAG
CTGCTGGCCGACGCCACGGCCCGCATGGTGGAGGCGGCCCGCCAGTGCGCCTCCTCGCCA
CAGGATCGAGAAAAGCAAGAGGTACTTCGTAAGGCGGCCGAGGAGCTGCGCTTCATCACG
GCCGACTACGCGCAGGGACAGGACATCGTCGGCTCACAAGTGGCCAGGCTGCAGGAGAGC
GCCCGGCAGGCGACCTCCAGCGCCACGCAGCTGATAACATCGGCCCAGAACGCGACGCAG
TACAACACCAACAGATACTCTCAGGAGACCCTTCTAGAAGAGTGCAAAGTGCTGAACGAG
CACCTCCCCCGCATGGTGGAAGCCGTGAACGTGTCCAACGTGAAGCCGACGCAGGCAGCG
GCCAGGCTCGACCTCATCTCTGCATCTGAAGCCTTCTTACAGCCAAGTGGCCACGTGATC
TCAGCAGCCCGAGGCGCCCTGCCGACCGTAAGCGAGCCTTCCGCAGCCAAGCACCTGGCC
GACAACACGCAGCTCTACACTTCAAGCTGCGCCGACCTCAGGTCCGCAGTGAGCAGAGCC
AGGATATCCTGCAAGGGCTTGGAGCTGGACGCGGCGGCGGAGATCATCAAATCCCTGCAA
GAGGAGCTTGATGAGCTGGAGGAGGCGGTCAGGGCTTTCGACCTGAAACCCTTACCCGGG
CAGACGGCGGAGTGGGCCGCGGCCACCATGAACTCCGCGTCCCGCGCCGCCGCCAGCTCC
ACCGCGCGCCTCGTGTCCGGCGCCAG
(866 bp)

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