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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp10070_c0_seq3
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		DEAD-box_helicase_Dbp80_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005737 C cytoplasm
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0010501 P RNA secondary structure unwinding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0031965 C nuclear membrane
GO:0044614 C nuclear pore cytoplasmic filaments
GO:0051028 P mRNA transport
Transcript
Level		FPKM:17.78 TPM:19.17
ORF EntryO_BomoOtmSK5089_complete:A_BomoOtmSK_comp10070_c0_seq3
Sequence
(Nucleotide)
TGAGTGACTTGTCTTGCTTGTTGCCGCTTATTGGATCATAAACAGTAGAATTATAGGTGT
AGTAATAAGTAGTTGATTCTTCTAAGTCATAAATATGGCTAGCCAGTGGGGACAAAAGGC
AGAAGAGTTGGAGATTTCAAATAAAGTTGCAGGGCTGGGCTTGGATAAAAAACATAACCA
AGAAACAGATTCTGATGATGTACCTGATACCCCTAATGCAGCAGATACTTCTCTTTTAAT
GAAAATCATACGGCAAGGTCTAGTTGAATCTAAACTAGATATAGAAATACAGAGAAAAGA
TCCTAATTCACCATTGTATTCTGTAAAAACATTTGAAGCTTTGCATTTGAAGCCAAATTT
ACTGAAAGGGGTTTATGCTATGGGTTTTAATGCTCCATCTAAAATTCAAGAAACAGCACT
TCCTACACTCTTAGCTGATCCTCCACAGAATATGATAGCCCAGTCACAATCAGGTACAGG
AAAAACTGCTGCCTTTGTTTTAGCGATGTTAAGCAGAGTTGACTCTAACAAGAATTATCC
TCAAGTATTGTGTCTTAGTCCCACATATGAACTAGCCATACAAACTGGTGAAGTTGCCGC
AAAAATGGCAAAATTTTGTCCTGAAATAAAGTTAAAGTATGCAGTTAGAGGGGAAGAACT
TCCCAGGGGTTCAAAAATCACAGATCACATTCTTATTGGTACTCCAGGAAAGATGTTTGA
TTGGGGTGTCAAGTTTGGCATGTTTGATATGGGTAAAATTAAAGTTTTTGTGTTAGACGA
AGCAGATGTCATGATCAATCGACAAGGGCATCAAGACCAATGCATTAGAATTCATAAATG
CTTACCATCAACATGTCAGATGATGTTTTTCTCTGCAACATATGGTACTGCAGTCATGCA
ATTTGCTGAGATAATTGTTTCTAATCCAATTATAATCAGACTTTTGAGAGAAGAAGAATC
ACTGGATAACATAAAACAATATTATGTAAAGTGCAAAAGTGCAGAAGACAAATATAGAGC
AATTTGTAACATTTATGGTGTAATAACAATTGGTCAAGCAATTATATTTTGTCATACACG
AAAGACTGCAAGTTGGTTGTCTGAAAAGATGTCAAAGGATGGTCACTCAGTGGCTGTCCT
TTCTGGTGAATTGACAGTTGAGCAGAGAATTGCAGTACTGGATCGCTTTCGGGTGGGTCT
TGAAAAAGTATTGATCACAACTAATGTTTTGTCTCGTGGAATTGATGTTGAACAAGTTAC
TTTAGTTGTCAATTTTGACATGCCTATGGACATGAATAGAAAAGCAGATTGTGAGACATA
TCTGCACAGAATTGGGAGAACTGGTAGATTTGGAAAAGCTGGTATTGCAATTAACCTCAT
AGACTCTCCACAAGCTATGGAGATCTGTACAGACATTGAAGCACACTTTGGTAAGAAAAT
TCAATTACTGGATATTGAAGATGCAGAAGAAATAGAAAAGATTGGGGCTTAATCAAAATT
AAATTTGATAAAAAAAAACTCATTTCTACTTTTTATATTTAAAAATGCTCATCTATTGCT
TCTTATCAGGATAACCATCATAATAAATGTTTGTGTAGAAAGCAAATTTGTAATTTCTTA
CTCAATTACCATATTACCATTTTCCAGTCTTGATACTGCAATTATATTACTAAATTATAA
TATTGCTTTAAGCTCTTCAGGAAGGATTTTTTTACATTACAAAACACATTATTTGTATTT
ATTACTTATGGCAAACAACTAACAAAAATAGTGAATATTCAATAAAAAAAAAAATATCCA
AAAAAAAAAAAAAAAAAAAATTCCCCCAAAGCTTTGCGTTTCCCGGGGCATTTAAAATTC
CAATTTTGGGA
(1871 bp)

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