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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp10049_c0_seq1
Scaffold_idBomo_Chr6
NCBI non-redundant
(nr)		chaoptin_[Bombyx_mori]
Ontology
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007601 P visual perception
GO:0016020 C membrane
GO:0016028 C rhabdomere
GO:0032528 P microvillus organization
GO:0035996 C rhabdomere microvillus
GO:0042051 P compound eye photoreceptor development
GO:0042052 P rhabdomere development
GO:0046658 C anchored component of plasma membrane
GO:0050896 P response to stimulus
Transcript
Level		FPKM:1.70 TPM:1.84
ORF EntryO_BomoOtmSK5051_5prime_partial:A_BomoOtmSK_comp10049_c0_seq1
Sequence
(Nucleotide)
GTGAAGTTTGGTTACACCCTGGTGGCTGTGACCTTACTGCTGATGATATGGGCGTCGTTG
TCCCGAGCTATAGAGCTTCATGTGGACACGGGACATCCGCCATGCTTGTTCCAAGCACTC
TGCACTTGTTCAAAACCAGCTGCAGATCTCGGCATCGTGACCTGCAATCACGTGCCCCTT
CTGAGGGTCCCCAGTACCATCAACAACTCCAAGGTGTTCATGCTGCAGCTAACTGGAAAC
AAGATCCGGGATCTAGAGCCACAGTTCTTTCAAACTACAGGACTCTACAGACTAGCTATA
AACAAGAACCCTTTGGAAAGTATACACGAAGAGGCCTTTTACGGCTTAGATAATACACTG
TGGGAGCTCGAGTTACGTGAAGACAAACTGATTGCAGTACCGAGCAGAGCGCTAAGATAT
CTGCAGAAGCTACGGTTGTTGGACCTATCAGGCAACGAAATCACGGACATATCAGGCGAC
AATTGGCGTGGACTAGAGAACACTCTGCAGATATTGATTTTAGCCGACAACTCGATAGCG
AACCTACCTTTAGATGCTTTTAGTGGACTGCCCTTATTGGAGACACTGGACTTACACGGA
AACCACTTGTCTGTTATTGACAGCGGAGTGTTCCGTGATGGAATGAGCAGATTAAATAGG
CTGTTGTTAGGAGACAACCAGCTGTCGTACATCCCTTATGAGGAACTGTCACCATTAAGG
CAATTGAGGGTCTTGGATTTGTCCAGTAACGTTATAAAACAAGTACCACCGTTACATGAT
CTAAACGGAATCAAACTTTCTTTGGATCTCTTGAAACTAGACAACAACATGATCCAGGTT
CTGTATCCGGGCGCATTCAAATACTTCAACGTATTGAACTCGACGACCCTCGACCGGAAT
CCAATCGTGACGATAAGAGAAGACGCATTCCGTAACGCGAAAATAAAGTCTCTATCGCTA
AGAGACTGCAGTATATCCGACCTGTCTCCAGCAGCATTTGCTGGTTTAGAGAACAGTCTG
TTTAGCTTGGACTTATCCGAGAACAACTTGACAATGGTGTCCAAATTCATGCTGAATAAA
CTCGATTCTTTAAGGTTCTTAAATCTGAGAGAAAATAAGGTTGACATAAGCTTACTGACC
ACAAATATGCCGTCGGAGTATCAACAAAGTGCTTTCAACAGTTTCCAATACAGACTTTTT
TCGTTAGACGTGAGCGGCGCTAACTCTATAGAAATCAGTCTGCAGGATGCTAAGAGAATG
AGGTCGTTGAGGTCTCTGTCGGTTGGCAAACTGTTACGTCAAAGCATTAAGACTGAAGAT
TTCCTGGATTTCGGTATGGAGCTAGAAGACCTGAAGTTATTTGGCAGCAATCTCATCAGG
ATCGAATCGAGCGCCTTTCAATATGTCAGGACCATCAAGACCCTGGATCTCTCGGAGAAT
AACATAGAGTACATCGACCCGTTCGCTTTTGCCGAGCTGCACAGCCTTACCACATTGAAG
ATGGCGCGCGGTTTGTCCGAATCGGTCATAATTCTACCGTTCGAGCCGCTGAAGGCGCTG
ACCGAACTCCAGTACCTGGACATGAGCAACAACAAACTGAAAAACGTGCCGGACACCTCG
TTTCATTTCTTGAAGAACTTGAGATCGTTGAACTTAGAAGATAACGCAATAGAACACTTT
TCAAAGGGAACTCTACAAGCCGATATCCACGGAAAATTGGAGAGCATATGCCTCTCCTTG
AACCAGATGAAACAAATAGGGCAACACACATTCGTCGAGCTGAAGGAAATGCAAGAAATC
CTCATAGAAGATAACCTCATACAGTACATACAGAGGAGAGCGTTCGCCAGCCTCGATAAC
TTGAAAATTATCAAGCTCAAAGGGAATCGAATCAACGAAATTTCGGAGGAAGCATTCCAA
AACATACCGGCTCTCAAAGAGCTAGACGTCTCGTTCAACAAACTGGAAACGTTTAAGTTC
TCTATATTCGACCAAGTGGGAACGGCAACGGCTCTGAAAGTGAACGCTTCATACAACAAC
ATCATTGTATTGACCGATTCGAACGCACCTAGTATCTTCTCTTCGAATTTTTATCCGCCA
CCGAAAGCGCAGAGATTGAATTCATATTACGGAGATTTCCCTATATCACCAGGTCTCGGA
ACTGTGTCCGTAAATTTGAGAGTGTTGGATTTTTCCCACAATAATGTCACATATATCGCG
CCTTATTACTTCAGGCACGCCGACTTAACGCTATCCGAGTTATACCTGTCCCACAACAAA
CTGAGGAACATAACGAGAGAAGTATTCGGTTCTATGGTCATGTTGCAATACCTGGATTTA
TCCCACAACCACATCTATCACATGGAATACGACTGTTTTAAGAAAGTGAAGAATTTACAG
ATCATAAACTTGTCCCACAACCACCTCATCGAACTGCCAGTCGGAATGTTCCACGACATG
CAATCT
(2466 bp)

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