SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp10032_c0_seq1
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		irregular_chiasm_C-roughest_protein_isoform_X3_[Bombyx_mori]
Ontology
GO:0001745 P compound eye morphogenesis
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005913 C adherens junction
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007409 P axonogenesis
GO:0007520 P myoblast fusion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016202 P regulation of striated muscle tissue development
GO:0030165 F PDZ domain binding
GO:0042802 F identical protein binding
GO:0045177 C apical part of cell
GO:0046331 P lateral inhibition
GO:0046666 P retinal cell programmed cell death
GO:0046667 P compound eye retinal cell programmed cell death
GO:0048749 P compound eye development
Transcript
Level		FPKM:2.66 TPM:2.87
ORF Entry
Sequence
(Nucleotide)
GTGGGAACAGACTCTGGCAGGCATTCAACCGTAACCGTCTCCCCTTCCGCGCCTATCTGA
GTCCTATTCGAAGTTATTTTTGGAGCGCCTTTAATAAAAACGGTAGCTTCACTTTCAATT
TCTGGGTATCCGGTGACACTCGATTTGCAGATATACTTTCCTGCCGTCTCTTTGTTCACA
ACTATCTCCAAGTTCGGGGATTTTCCTTTAACCCCGATCCTGCCAGGCTCATTCAGAAGC
CACCTGATCGCCGGCTTCGGCTGCCCATCAACGTCACAGCTAAGGGTCACAACC
(294 bp)

- SilkBase 1999-2023 -