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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp10017_c0_seq1
Scaffold_idBomo_Chr6
NCBI non-redundant
(nr)		Heterogeneous_nuclear_ribonucleoprotein_Q_[Atta_colombica]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006397 P mRNA processing
GO:0007623 P circadian rhythm
GO:0008380 P RNA splicing
GO:0010467 P gene expression
GO:0030425 C dendrite
GO:0030426 C growth cone
GO:0030529 C ribonucleoprotein complex
GO:0043086 P negative regulation of catalytic activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0043679 C axon terminus
GO:0044822 F RNA binding
GO:0061014 P positive regulation of mRNA catabolic process
GO:0061157 P mRNA destabilization
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:2.44 TPM:2.63
ORF Entry
Sequence
(Nucleotide)
ATATAATGACTTCAACGAGGCCAGGTGCGTGCTTAGAAAACTCCTCAAACAATTCGTCCC
GATCTCGATTCTTGGGAATATTCCCCACGAATAACCGGTGATTGTTAAAGGAAACGGTAA
CGCCAATCTTTTTCCCCTTTCGAATTTCATAATCATTCAGCTGCAAGAACAATTGGAGGG
AGAATGGCCGATGGCCAAGGGCCGAGGCTGGCCTGGGCCGGCTCGGCCAACAATGACTGG
AGAGGGCAGGCAGGGGCAGGCAGGGACAGGCGGGGGCAGGCAGGGACAAGCGGGACAAGC
GGGGCACCCTCAGCGGTCCACACCAAGCCCCACGCACTCAACCCCAAAACATCTATCAAT
TCTTTAATTCATTCGAGTGAAACTTTACCTGTTAATTTACCAAACTCTTCCA
(412 bp)

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