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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoOtmSK_comp10004_c0_seq1
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_MYCBP2_isoform_X2_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008045 P motor neuron axon guidance
GO:0008270 F zinc ion binding
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0021785 P branchiomotor neuron axon guidance
GO:0021952 P central nervous system projection neuron axonogenesis
GO:0030424 C axon
GO:0032880 P regulation of protein localization
GO:0042177 P negative regulation of protein catabolic process
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0048667 P cell morphogenesis involved in neuron differentiation
GO:0051493 P regulation of cytoskeleton organization
Transcript
Level		FPKM:1.79 TPM:1.93
ORF EntryO_BomoOtmSK4999_internal:A_BomoOtmSK_comp10004_c0_seq1
Sequence
(Nucleotide)
GCGCCGAGGGATCGTTTCCCGGTACTGTTCGAAACACCAGTACCAATAGTTGCAAACCGA
TGGTATTTGGCATGGGCTTGCATGAACGGTCCATCATCGGACTGTGGTTCTTCGGGACAA
GCGATGGTAATAAATGATGAAGTCGGTTTCCATTTCAAATCTTCGAAGAAATCGAACAAC
GGTACCGACGTTAATGCTGGGCAGATACCGTGTCTCCTGTACAATATTGCAACGCCCGAT
CATAATCTTCCAATGAGGATTACCGACCCGGGAGAACCAATAATTCCTCTCAGTAAAAAT
ATATCAAGGAAAGTTACAGTGCCGTGCTTCAGATCTTTAATATCACTATTAACTTGGGGA
TGGGCATCTTTAAAAGAATTCATTTTGGACACGAACGGACAGATTCCTATTACCTACCAA
AAACTGCTGTTGATGAAGCAGCAAAAGCGATTAGTGTACGTGGTGAGGTCTTGTCTGAGA
CTCGTGAAGTTCTACATCAACGAAATATACCCTCAAAACAACAGAAAACGCAATTCGCAC
GAGTATATGTCATACTTTGAATCCATAGGAGAAGTGAGGAATTTAATACAAATGATAATG
GCCGATTGTACCCCAACTTGCTCTCGGATCCCAAGACGAGTGGGCAGGATTAGGTCTAGT
CGAGTTTGCTATGTTCAGTTTGCGTTGGAGCTGATGCATTCAGTTTTCAATGAGGCACAC
GACACGGTCACTGCCTGTTTTCACGCATTCTTTCCGACGCCCACTTTAAAATGGAACCAC
ATGTGCAGCCTGCTATTTTATGTAAAGGAGGGCACAGTGCCTCCTGCCCAAATTCGTGAG
CTGACGGCTACGTGTGCCGCGATGTGTGTATCAAGGAGTCTGCGAGATGTTTTGCAATAC
ATAGTTCCCGTCACTCAAAATTATCTCATAACGCATGAGAATAAGCGCCCCGACAGTAAG
GTTGTCAAAGAAATGCCATTGAAATCGGCGACCGTACCTAGATCATCGTACGCCCAGAAG
CCACCTCCTATTCCGCCCAGAACGGGAAATATGGAATCACCGAAGTTTCAAGAGACGACT
GAAACGAAGCAAAACTTCAGCGACTGGCATCTGTTGGATGTGATTACCAAACTACTCGAT
ATTGTACTTCTTCCGATCAAGCGTCAGATGATGACGCGTCCTTGCAACCAGCCTCACGAT
CACGGCGAGATCAAGCAACACGAACGACTCGCCGAGTTTTGCTGCAAACTTACCGTCAGA
ATAGTTGCCGAACTTACCCACAGCACTGCCAATATTAGGGACGACGTGGACTCTAGTTCG
GTGAAACACTTAGTGACGCCTTCGCGTTTTATGCGCGTCAATCAGTCGCGCGCCTGGAAC
ACCGGCAACGGAAGTCCGGATGCTATATGCTTTACCGTCGATCGGTCCGGCGTTATGTTG
GTCGGGGTTTGCGTTTACGGCGGCCCCGGGAACGACGAAAACTCGATCGAGCTGCTGAAC
GACGTCAGGCAGTCACGGTCGTCGCCGGAAGAAATGAATCCTGCTCATTGTTGGGTTAGC
GTCGAAGTTGCTCACGGCGCTTTCAGTGGAGCCGAGTGTCAGCACGATATGGTGCAGTTA
AAGTTTGACCG
(1631 bp)

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