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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR30596_c0_g3_i1
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		PREDICTED:_DNA-directed_RNA_polymerase_I_subunit_RPA1_[Papilio_machaon]
Ontology
GO:0000183 P rDNA heterochromatin assembly
GO:0001054 F RNA polymerase I activity
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005736 C RNA polymerase I complex
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006361 P transcription initiation from RNA polymerase I promoter
GO:0008270 F zinc ion binding
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:30.10 TPM:40.09
ORF EntryO_BomoN4EE13294_complete:A_BomoN4EE_TR30596_c0_g3_i1
Sequence
(Nucleotide)
AAAATCCAGAGAATGTTGAAATCATAGACCTTGTTGAAATTAGGTTCACAATATATTTCA
AAATATAGGAAATAAACAAAGATAAAAATATGAAAATCGATACGATATAAAGTAACTTAT
GAATATACCTGTCTTGCTATTCACATAAATACAATATGGCTTTTAAATCGGCGTTTCCAT
CATCAACGTCTGGGTTGTCCTCCGTCGAACCCGAACACATACAGTTTCTTATGTTCACTG
ATGAAGATATAAAAAAGTTGAGTGTAACAAAGATAACACAAATCCAATCGTTTGACGCCA
TCGGTAACCCTACTAAGGGAGGCCTGTACGATTCTGCACTAGGACCACTAAGGGACAGGA
ACGATAACTGTGAGACATGTAACAATTCGTTACTGCATTGCCCTGGACATTTTGGACACA
TCGAACTACCCCTCGTGGTAATTAATCCACTCTTTACAAAAAGTATTTACATGCTGTTCC
GTATAAGTTGTCTCAAATGTTTTAGAATACAACTTGACGATCGCTTAAAGTCGCTATTGA
AACTGCAATTGGATCTAGTAGATGCAGGGCATATAACAGCAGCTTTAGACCTTGATTACT
ATGTAAGTGAAACATACAGTAGTAAGGAGTCTCCGGACAAACCGAATAAAACTATAAGAA
AGTATAGAAAACTTTTGAAAACAAAAGATGTAATTGTGGAAACATTTCACAGTAAAAACA
CTGATAAAATTAGAAGTAAAATAATAACAGGCTATTTTAGGAGCATGAATATTGTAAAAA
AATGTATGTTTTGTATGGCCAAATTAATAAAAGTGAATACATCTGAAGGTAAAATAATGT
ATAATTTGAGTGCTGAAGGTTCAACATCAGGAACAAAAGGCATTAAAATATTGATGCCGG
ACGAAATCAGACGTTTTTGTGTGGACATTTCAAAAAATGATGAAGATCTATTAAAATATT
GTTTCCCTGTATTGAAACATACATCTGCTAGTCCAGCAATAAATATATTTTTCATGGAAA
TTGTGCCTGTGTTACCTCCGTGTGTAAGACCCTGCAATATCTTGAGAGGAGAACTGATTG
AGCATCCTCAAACTAATGTTTATAAAGCCATATTGTTACACTCCTATGCTGCTAGAGTCA
TTTTACAAGTTCTCTCAGCCTCAAATCAACAAAAGGCTCAAGACTGCTTAGATACAGCAC
CAAGACAAGCATATGAATCTGTTCAAGGTAAAACACCAGCTGAAAAATTACATGTTGCGT
GGCAGGACCTACAAAAGAGTGTTAATCATTTGCTGAATTGTGAAGGCATGGGAGCATCAA
GTCAAGGTCTTAAACAGATACTTGAAAAGAAAACTGGCTTAATAAGGATGCACATGATGG
GCAAAAGAGTGAACTTTGCTGCAAGATCTGTCATTACTCCAGATCCCAATGTCGACATAG
ATGAAATAGGCATCCCAGATGCTTTTGCCACAAAACTAACATATCCTGTCCCGGTTACGG
AATGGAATGTTGATGAGCTACGTAAAATGGTAATCAATGGACCCAATAAACATCCAGGAG
CAGAGAAATTAGAGATTGGGAATGGTAGAATAATTAGAATACCTGCTGACTCTATACAAA
AACGGAAAAGTCTTGCAAAACGCCTTTTGACACCTGATGAGTACAAAACAACTGGTTTAA
AGACAGTTCACAGACATTTGGTGAATGGTGACATTTTGATCCTTAACCGGCAGCCTTCTT
TACATAAGCCTAGTATGATGGCTCATCGAGCAAGAATATTAAAAGGAGAGAAGACCCTTC
GACTACACTATGCTAACTGCAAATCATACAATGCTGACTTTGATGGAGATGAAATGAATG
CCCATTTCCCGCAAGACGAAAATGCAAGAAGTGAAGCATACAACATAATGTCTGTAACAA
AGCAATATCTAGTACCTAAAGATGGCACACCTCTAAGCGGTTTGATCCAAGATCATGTTA
TATCTGGTGTAAAAATGTCACTTAGAGGTACTTTTTATAATAAGTCAGATTACCAGCAGT
TGGTATTCCAAGCTCTCTCAAATCACAGAGGTAAAATCCAGCTGTTACCTCCTACCATAC
TGAAACCTATTGTACTGTGGTCAGGTAAACAAGTTCTATCTACAATAATTATCAACACCA
TACCTAAAGGGAAACCATGCCTTTCGTTAACTGGTAAAGCTAAAATCAGTGCCAAAGCCT
GGCAGAAAGAAGAACCGAGGCAATGGAATGGGGGTGGCAGCCCATTTACCAATCCGAATA
CCATGACTGAAGCTGAAGTCATCATCAGAAAAGGTGAACTATTGTGTGGAGTACTAGATA
AAACTCACTATGGAGCGACACCTTATGGCTTAGTCCACTGCATGTATGAATTGTACGGTG
GGGAATGTTCTAGTGCATTATTGAGTTCTTTTTCTAAAGTCTTCACCTTTTATTTACAAT
GGATGGGGTTCACTCTAGGTGTCAAAGATATTCTAGTTGTCAAAGAGGCGGATGATAGGC
GAGATAATTATATTTGTTTGGTTCGAAAATCTGGTAAAGTTGCAGCGGTAAAAGCTACTG
ACTTGCCGATGGATGTTGATGACAACAAACTAAAAGATACAATTGCAGAAATGAATGCAA
AAGATCCCAAATTCAGGTCCAATTTAGATAGACATTATAAAAATATGCTCGATTCTTACA
CAAATAACATAAACAAAGTTTGTTTATCTGAAGGTCTTCTTGAAAAGTTTCCATATAACA
ATTTACAATTAATGGTACAGTCTGGCGCCAAGGGTTCTACTGTCAATACTATGCAAATTT
CATGTTTACTTGGGCAAATTGAATTGGAAGGTAAAAGGCCTCCGCTAATGATATCAGGTA
GATCACTTCCAAGTTTCCCTCCCTTCGATGTGTCTCCCCGAGCTGGCGGCTTCATTGATG
GCCGCTTTATGACAGGGATCCAGCCCCAAGAGTTCTTCTTCCATTGCATGGCCGGCCGTG
AAGGTCTCATTGATACGGCAGTGAAAACCAGTCGTTCCGGTTACCTACAAAGATGTTTGA
TAAAACATTTAGAGAGTATATCTGTAGCTTACGACAACACGGTTCGCGATGCCGATAGCA
GCATCATACAGTTTGCGTACGGAGAGGACGGCCTTGATGTCTTGAAATGTCAGTTCCTCA
AGCAGGACCAATTTGAATTCCTCGATAAAAATTCTAACGCGGTTGTTAGCAAATCGGTTA
TTAAAAAATTAAAAGAGAACGTCGACGGAAATGACGTTTTGAAATTGCAAAAGTCTCTGA
AGAAGTGGAAGAAAAGAAACGGCAATCCATTGCAAAAAATTCGCGTTAGTGGATTCAGTC
AATTCTCTGTATTAGCCAGGAAGGAAATCGAACTAGACGATCTTCCAACAGACCGAACAA
GAGATCCGTATTATTGGGAACTAGAGAAGAAATGGCGAGAAATGGACGAAGATGAGAAGC
AACAATACATTAGGAAACCCTGTCCAGATCCTATTTCAAGCAAATCGCCCCAATTTAAAT
TCGGGGTGATAAATGAACAATTGGACAACATAATACAAAACTACCTTAAGAATAGATCTA
CTGGTCTCTATGAATCTTACACAGATAAGAAGAAATTCGTTGAAGTAATGAGCGCTAAAT
TCTTGGAGTCTATGGCTTCACCTGGAGAGCCTGTGGGATTGCTGGCCGCCCAGTCTATCG
GTGAGCCCTCGACCCAGATGACATTGAACACCTTCCATTTTGCCGGTCGAGGTGACATGA
ACGTCACCCTCGGAATACCACGTCTGCGGGAGATCCTAATGACTGCATCAGCCAAACTTA
AAACTCCCAACATGGACATACCTTTCCTAAACGTGCCGGACGTGACAAAAAAAGCAGAGA
AACTGAGACAGAAATTGAACAGAGTGACTATAGCGGACGTTCTAGAAAAGATTGACGTCC
AATGCGAAATCGTTGTGAGACCAGAGAGACAATTGAAGACCACCATGAAATTCACATTCT
TACCCCACAAACAATACAAGACGCAGTACGCTGTCAAGCCGACGCAAATTATAAAACACA
TGCAAAATAAATTCTTCGATGAAATGTTTACGGTGGTGCGGAAGCACGCCAAGGCCACGT
GCGGCGTGATGTGGGCCTCCGAACAGAAGAAGCAGCGAGCCAGGGCTGCCAAGAGCGACG
AGGACGACGGCGACGACGCCCCGGAGCCAACAGACACGGCCAACAACGACCTGGACTCTT
CAGACGATGAAGCACCTAATGAAGATGATGATAATACAGCCGCCAAGATTCGCAATAAAA
GAACAGAAGAGCAAGAATACGAGGACCCAGAATCAGAGGAGGAAGAAAAATCTGACGATG
AAGTGGAACTCGTCGATGATCAAGCGAAGGAGTCCGAAGAAGGTCAAGAGTCTCCAAAAG
AAATTGACGCCGATTCCAGCAAAATTATTTCCGATGTCGTTGGTAGCGTCAGAAACGCGA
CTAATTACACATTCGACACAAAAAATCACCAATGGTGCGAACTGACCGTGCTGTTCCCAA
TTTCATTTTTGAGAATAGATTTGTCTCAAGCTCTACGAGAAACCGCCATGAAGTCTGTCG
TCCACGAAATCAAACACATAAAACGTGCGATCACGCATAAAGACAACGACATCGTCTATC
TAAAAACAGAAGGTATCAACATATTGCAGATGTTCAAATACAATCATTTGCTGGACATGA
ATAGACTGTACAGCAACGATATACACGCGATGGCCAACACGTATGGCATCGAAGCCGCCA
ACAAAGTCATCATAAAGGAGATAAAAAACGTATTTAACGTTTACGGTATAACCGTTGATC
CGCGCCACTTGACCCTCATAGCCGACTACATGACGTACAACGGGATCTTTGAGCCTATGA
GCCGGAAGGGAATGGAGGCGTCTTCGTCGCCGTTACAGCAAATGTCGTTCGAATCGTCGC
TTTTGTTCTTGAAGGACGCCATATTGAATTCTAAGAAAGATGATCTCCGGTCCGCCTCTA
GCTGTCTGATGGTCGGCCGGCTGTGTCGCACCGGCACCGGCGTTTTCGATCTGCAGCACT
CGCACTTGTATGGCAAAGTTAATCTGTCTAAGTCGTGACCGCCGCGTCATTCACCGTGCT
TTTCGATCGGTCGAAGGTGCCTGGCTGTATAGACTAAAGTCCTTTGCCTTTCCCATTAGG
GATAAATTAATATCATCATCATCGGTCGAAGGTGTCAACTTTGACAGTTGACAGTTTAGT
ATAACAGAATACGCATCATTCATCCAGCAGCCTCGGTCGGAAGACTTAGCAAATAAATTA
AAGGCGAATTAATCGGTTTTTTTTTCGAGGCTAATAATGAAATATGCCCATTAGTGTATA
TGATTTATAGTAATCATTGAAATCAAATATAAATTTTTGGGTGGAATTGAAAAATAAAAA
TACATAAAAGTTAAAAAAAACTAACAAAAT
(5490 bp)

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