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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR30593_c0_g2_i1
Scaffold_idBomo_Chr26
NCBI non-redundant
(nr)		Retrovirus-related_Pol_polyprotein_from_type-2_retrotransposable_element_R2DM_[Exaiptasia_pallida]
Ontology
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:0.78 TPM:1.04
ORF EntryO_BomoN4EE13256_complete:A_BomoN4EE_TR30593_c0_g2_i1
Sequence
(Nucleotide)
GTACCATCCTCTGTTACCTAGTGACCGAGGTACTTGAAGCGTTTGACTTGTGCAAGCGTT
GCGTATGCTAAGTATAAATTATTATTATGTAGTATAATGTAGTATAATAGTAATAAATAA
GCCTCTCAAAGCCCAACCCCACGTCCGTGTAAAACATCTAAACCACGTGAGAGGCGGACA
TCTGAAACGAAATTACCAATCAGTTGACCAAAAGGGCCATGGCAACCCCCAAACAAATGG
AGAGAAGAAATAAAAGTAAACGTTTAATGTCGCTACCCGAGGGTGATCGTCGGGGCACGT
CTGGAGCTGACGCTGGATGTGACAGTATACGGACCGTCAGTGGCTTCTCGTTGAACAGGC
GGGCGAGAGCCGGGGAACCCGAAAGGACCACAGCCGACCATAACCGAGACACCGATGTAA
CTTTGCAGAGCGGGGAACTTCCCACTAGCTCTGCCGGTCCATTGGTAGAGACCATGACAA
GTTCAGTAGACACTAATGATTCGAGAAGGAAGTGGTCAACAGAAGAGATACACGAATTAA
TGTTTTGTTACTACAAGGCTAAGGCCGAAGGAGTAGGTTTTATGAAGCGTTTAGAAATGT
ATTTTAAAGAAAGAAATCCAAATAATCCTAAGATACATAAATTCACAGGCAACACACTAT
CCAACCAAGCCCGAAGCATAATCAACCGAAAATGGGTTTCAACACAGCTATTACAAGAAA
TTAAAATGAAAGCAGAACAATCTAATAGGGAAACAAACAGTAATTTACCTGACAACAATA
CAATTTTAGTTATACCATCACCTTTAGTGAACAATACACAACCTACACTGACGACTGTAC
TGGAACATACGCCCACAGACAACGTCAATGTTTCACCTTACACACAGGCTAACCAACTAC
TAGACGATGAGATTACAGATATACGTACAGATCAGTACACTTTAGATAAAATAGGGACTT
TTAATATAGATATGCATACACAGCAAACACAAAGCTTAGATGAGCCCGAGGCAATTATTT
TACAGTTTTTACAAGTACTATCAGAAACAAAGGAGACATGTATAACAGACCGACCTTGTC
TACCAAAACCAAAATTTAATAAAACTTTCATCGCCAATTTAGGTAAAATTAACACATACA
TTCCTAATTTATTAGATACACATAACACCTTACGAGAACTAAATAACATAATTTATGCAG
CGGCAAAGACACTCATTATTGCCAATGGGCAAAAGACATTCACACCTCGCACTACAATAA
AACCCAGAAGTGATCCCCCTTGGAAAAGAAGAATAAAGAATAAGCTTGAGGACATTAGAA
AAGAACTAGGTAGATTGGTGGAAATTAAGAAAGGAGTCAATAGCAGACGACTGATAAAAA
TTAAAGATAAACTTTATGAAAAGCACAAGATATTCAGCGATATGGACCATGACAAGACAG
TTGAAGTTTTAAGCCAGAGAGTCAAAGCGTTGGCAGGTAGGATAAAGAGGTATGAAGATA
TTAATAAGAGAAAGGAACAAAACAAACAATTTCGCGAAAACCAACATGCATTTTACAGAT
CACTTAGTGCAAATAAAAAAAGTCCGACAGAAATTCCAACAAAAGAAAACATACAACAAT
TTTGGAGTTCCATCTTATCACAACCTATACCATACAATAAACAGGCAGAATGGATAGCAG
ACATACAGAATGAAACAGATGATATACATAAGCATAACTTTCAAGAGATAACTGTAGAAA
GAGTAAAAACCGCAATAAGAAAAACACATAATTGGAAAACGCCTGGACTCGATAAAATAC
AGAACTATTACTTAAAATACCTCACTAACATACACCCACACATTACTCACTTATACAACA
AACTATTAGATGGAAGAGAGACGCTGGAAGAATGGTTCACCACTGGACAAGTTATTTTAA
TTCCAAAGAATGATAACACACAAAATCCACAGAACTGGAGACCAATAGCCTGCCTGCCAA
CCATGTATAAACTCCTCACCTCTATAATTGCAAACGAACTATACGAACACTGCGAAACTA
ATGATATATTAGCTCCAGAACAAAGAGGATGTAGGCGTCGCGCTCGGGGCTGTAAGGATC
ATCTGATGATTAATAAAGCAATCCTGGAAGACGCCCATCAGTGTCAGAAAAATCTTAGTA
TGGGCTGGGTTGATTATCGAAAGGCCTTTGATAGTATTTCCCATGACTGGCTACTTAAAG
TTCTTGAATTGTATAAATGCTCACCTACTATCATTGACTTTCTAAAAAAGGTTATGCCCT
CATGGAAGGTGATCATGGCGGCCCGTGGCGTGAATTCCTCTGTGACAACAGACCTAATAG
CTGTCCGCCGTGGTATCTTCCAAGGCGATTCGCTGTCACCACTACTGTTTTGCTTAGGTA
TAAATCCCTTATCATTCCTTCTGAATAAATACATACAAAAAGGGTACAAACTTAAAAACA
ATACAGCTATTAACCATTTATTATACATGGATGATTTAAAGTTATATGCCAACAATAAGA
ACAGCCTCAAAGTTTTACTTGATAGCACAGAGATTTTTACTAGAGACATAGGAATGGAAT
TTGGCTTAAATAAATGCAATGTGCTTCATTTAACATCTGGAAGGAGAGCTGAGCACCAGA
GCGAAGGTCACATACTGTTGAGTGGCTTAAACTTCGAACATTTGAAGGAAGACGAAAATT
ATAAATACTTAGGTATAGATGAAGCAGGCAAAATAGATCATAAAAGAATTCAGGATCAGG
TGAAAAGAGAGTACTTCAAAAGAGTAAAATGCATCACTAACACACAACTTAGCGCGAGAA
ACCTCATAACGGCCATCAACACTTATGCCACACCAGTTCTTTTATACACGTTTGGAATAA
TAAACTACAAAAATAGTGACTTAAACAAAATAGATATAAAGACAAGGAAGATACTCACTT
TGAATAAAGCCCAACAACAAAAAGCGGATATCGAAAGACTCTATTTACCCATAGAAGAAG
GAGGCAGAGGACTTATAAATATAGAAATGTTACACAAAACTCAGATTATTAAATTTAGGC
AATATTTAAACAATGAACAGGACCAAATCATAAAAGCAATAGTTAAACACGATAAACATA
GAGATAAACATTCAATACACAAAGATGGTAAAAATAATGCAGTAAGAATAGAATTAACAG
AAAACAGAAACTACACCGATACTGAAATTAAGAAAGCAGTAATAAAGACTGGCATCAGTA
AATGGAAAGAGAAACCGCTACATGGACAATTCCGTAGGTCCGTTATAGAGAAGGGTAATA
TAGATCGAGAGTATTCGTTCCGCTGGCTTAAGAAACAAATCGTGTCCCCCACGTTAGAAT
CTTCAGTATTCGCTATACAAGATCAGGCAGTAATTACGAGACAAATAGAAAGAGATATTC
TAAAGAAATCTGTCGATGGTAAATGTCGCCTATGCCTAGCAAAAGACGAGTCCATAGAGC
ATATAATCTCGGGATGTGAAAAACTGGCCGGCACTTACTATGTGAACAGACATAACAACA
TAGTAAAGTATATTTGGTGGGCAATAGGAAGAAAACACAATTTTGAATTAGACTCGCTAT
GGTGGAAGGTGAATTTGACTCAACCTCAGATAAAAGAAAACAGCTCCGCGAAGCTAATGT
GGGAGATACCAGTGCAGACGGACGTTACAATAAAGCACAATAGACCAGATATAATATACA
TAGACAAGACAGAAAATAAAACCTACTTAATAGATGTAACTGTACCATCTGACTACAATA
TAGGACCAAAAGAACTGGAAAAACTTAGTAAATATCACCCCTTAAAAGTAGAACTAACAC
GACTCTGGAATACACACACAGAAACCATCCCCATAGTAATAGGCGCAACAGGCGTAGTGG
CAAAAAGTATACATAGATACATAAACAAACTGGAAGCAAATATAAACATACACATAATAC
AAAAACAAGCAGCCATACACACATGCACAATAATAAGTAAAGTTTTGGGTAATACAGTTT
TCATAAATTCAAGGGAGTCCGAACCTCCTCTTCCCTGAAGGTTTCAGGGCGGGAGCTAGG
AACTAAACCGAGTCCAGAACTCGAAAGAAAACTCATTAATAATATAATATTAATAATAGT
TAATAGTAATACACA
(4155 bp)

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