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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoN4EE_TR30589_c22_g2_i1
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		PREDICTED:_polyadenylate_binding_protein_2_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006378 P mRNA polyadenylation
GO:0006397 P mRNA processing
GO:0008143 F poly(A) binding
GO:0022008 P neurogenesis
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:57.92 TPM:77.15
ORF EntryO_BomoN4EE13194_complete:A_BomoN4EE_TR30589_c22_g2_i1
Sequence
(Nucleotide)
TGACATTTCATGCAAATTGTTTAATGTTTGGATCTAACCGAATAGCTATACATTAGCATT
TTAGAATGAATCCGTAAATATCTTGCATCAAATTGTGATTTTATGTAATTCGAATACTGA
CTGTAATTTGAAAACTGTCCTATTTGTTGTTATGAACTGTATTACCTGAGTAGGTCAACG
ATTTCATAGTGGATTTGGTTACCGTTTCAGAGAAGTAAAGTGATCTCGAAATATATAATT
CATGATTTCGACGCTCGGTGGAAATGGCAGAAAATGATGATTTTTTAGACTCGATTGACA
ACAATCATTTGGAAGGAACTAACGGCTCAATGAATATGACTGACAATAGTCTCGGAGGCG
GAGATGAAGCGGCCGGCGGAGAAGCTCCTGACCTTGCAGCTATCAAGGCCCGAGTGCGGG
AGATGGAAGAAGAAGCTGAGAAACTGAAACAAATGCAGACTGAAGTTGACAAGCAAATGA
GTATGGGAAGCCCACCAGGACTAACCAGTCCATTAAACATGTCTATCGAAGAAAAAATAG
AAGCAGACAATAGATCAGTATATGTTGGTAATGTTGATTATGGAGCCACGGCTGAGGAGC
TGGAGCAGCACTTTCATGGTTGTGGATCTATTAACAGGGTTACAATATTATGCAATAAGT
ATGATGGCCACCCAAAAGGCTTTGCCTACATCGAATTTGGCGACAAGGATAGTGTCCAGA
CTGCAATGGCTATGGATGAATCATTATTTAGAGGAAGGCAAATAAAGGTGATGCCGAAGC
GTACGAACAAGCCGGGCCTGTCGTCGACGAACCGCCCGCCGCGCACGATGCGCGGGCGCG
GGCGCGGCTACCGCGGCGGCCTCGCGCCCTACTACACGGGCTTCCGGCCCCCGCGACGCG
GCAGAGTCTTCAAGCGCGGCTCGTACTACTCCCCGTACTGAGTGTGGTAGTGGGGTCCGC
CCCCCCGGCCATGGCCCTCGTTAACCCATTAGTGAAGTGGCGCGCGTATATCTAACTGTA
GCATAGCGCGACAGTGTGACGCCGCCCGAACTTACACCCAGGACAATAACGCTCACTATT
CTGTAATCCACTGTCGAGTGACGTCATAAGACAGTAATGTGATCGCCTATGTAGCTATCT
ATGTCTAACATTGGTGTGTCCAAACAAAAACACCGCAGTGTGTCCCTGCATTTGAATTAA
CTTTAACGTGTTGTGTAGGTAAGAAATATCTTTTTTTTTTTTTTTAAATAAAAAAATCGC
GTGAATTTGTAAATTTTTATCAAGATTCTAATGTTGTATTGTCAACGATTGGTTTTATTT
AGAAGTTGATTTTATTTATTGTATAAGATCAATGGAAGCAAAAAAAAACTGTTAGTTTTA
AGTAATATAATAAATAAGTTGTAATATTGGAAATTATCAGGCTTGTGACATTATAAAATG
TGTGTAACTGATAAGTTCCTTACATCTTGTGTTCTAGATGCCTAGCCTAAAGAGTTAACT
GTAGAGATGCGATTACGCAGGGAATAGGTTCTGTGTGATTTTGGTAAATATGTACCTCGA
GTACCTCATTAGATAAATTAATGAGAAATAATCCTTAATTAACTTATCATTTCCCAACGA
GTTATTATTTTTAGTTTTTTTAATCAATGTGTATCGTCTTTCCCGCAGTGCTGTGTATTC
TGTTTTCTAACTTTGTCCTAGTAATCTCAAGAAAATAATGTTATTTAATGTGACGATCAA
GAAAATACGCAAGTGAAATAAGTATTATAACACTTTATATCAAAAAGTAAATCTAAATTT
TATACTGCGGCTGAGAGTTTATGTATTCTGTCAGCAATATAGACGTTTTTGTGTTTTTTT
GAAATCTACTTTATTTAATATACATTTAAGTTATGTACTTCCGGATATATTGATGAAATA
CATAGGTCCGTATCGAAGAACTACATTCTAACACTGTCAACGTGTCTGCTAAGTATTTCT
ACCATTTAATTATTTATTGTGAGCTCCGTTCGAATCAAGAAACGGAATTATATATACAAA
GTTCTAAAAGAGTTCTCATGATCAAAACATAGCTTAACAAGTAATATAGCCTACAAAATG
AAGTAAAATAGTGTCAAGTTTTCTTATATTCTAGGCAAATTGCAATACATAAAAACACTA
AGTAAGTGCCTTTTGAATCAGACTTATCACTTTATGATACACAAGCAGAGCCCAGAATGA
TATTCATATTATTAGTAGTTCTTTATGAAATTACGAAATAATAATTTATCCAGAAATTAA
AATCGAATCGTCGGTATCTTGAATAAGTTAAATGAAAATATATTCTGTCGTGTGAAAATA
TAATTTGAAATTGGAAACACGAAATGTTGAAAAACATTTTGCATAATTTGTTTAACGAAA
AAGAAACAAGTATATAATGCGTAACAGAAAAAAAAAACAAAAAACCTGAAACATAACAAT
AAGGATAATATTAAGCAGAAAAGCCTGTTGTTTTATTTATAAAAGCCTGGTTCAATCTAA
AACATGTATTATCGTATAGGTCGATTCTTCAAC
(2553 bp)

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